Detailed information on CNT30383861


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30494210Triticum turgidumOlea europaea34.338.4880.68207forward
CNT30632746Triticum turgidumCapsicum annuum28.6923.9392.49173forward
CNT30221828Triticum turgidumHordeum vulgare29.5220.398.31178reverse complement
CNT30656195Triticum turgidumTriticum dicoccoides24.5457.5999.32148forward

Expression of CNT30383861

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSISPSLSPRQCPDRYAFRAGRNLPGKEFR

>peptide 2 (29 aa)
YRSRWRRADIEVPILPVDVDSWGRSSCYP*

>peptide 3 (32 aa)
MARAPPEGGLLRLPPKLCRKGPKPIPGNSKAS*

>peptide 4 (31 aa)
LQVQVAKSRHRGANPSRRCGLLGKIILLSLE*

>peptide 5 (35 aa)
TGPGGEEPTSRCQSFPSMWTLGEDHPVIPRVTFIR*

>peptide 6 (35 aa)
MSVWPEETFARLCYLLGGLRPIETVYLRLSLGPRV*

>peptide 7 (57 aa)
MALPLGTVGSLRPTFVSARRVSLAVKLPSAFALEDQCPSGPRKPLHASVTFWEAYAP*

Sequence

>CNT30383861
CTACAGGTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAATCCTTCCCGTCGATGTGGACTCTTGGGGAAGATCATCCTGTTATCCCTAGAGTAACTTT
TATCCGTTGAGCGATGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCT
GCCTTTGCACTCGAGGACCAATGTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCTGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCT
GAGACTGTCCCTTGGCCCGCGGGTCTGACACAAGGTTAGAATCCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGGGGCCT
TCTTCGCCTTCCACCTAAGCTGTGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGC
ATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGGCAAGGAATTTC
GCC