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Detailed information on CNT30383595


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000045, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730400Triticum turgidumCorchorus capsularis83.0198.0492.081300reverse complement
CNT30574507Triticum turgidumVitis vinifera89.477.2692.571400forward

Expression of CNT30383595

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKHSTENWYGQGESDYLIKTKHCDGPRGC*

>peptide 2 (29 aa)
PLARGCSPWRPDAVMSTTGRERYSFRGMT*

>peptide 3 (41 aa)
MSPPFGSKARSYRADLGGRHCQVGSLAGAAHLLKDNAGVLR*

>peptide 4 (34 aa)
MNGLTRFPLSLSTIQRNHSQGTGLGGISGERRPC*

>peptide 5 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRDRAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 6 (54 aa)
MRHLRPPPAPTHVRGACAPKGPCHWLSRSGRRAAAGRLEAPFPTGGGLNPLQTT*

Sequence

>CNT30383595
CCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAACGGTACTCATTTCGTGGAATGACCTAGGCAAGGGAAG
TCGGCAAAACGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGACTGGGCTCGGGGGTCACGGATTGCTCGAGCTGCTCACGCGGCGAGAGTGGGTC
GCCGCGTGCCGGCCGGGGGACGGACCGGGAATCGCCCCTTCGGGGGCTTTCCTCGAGCATGAAACATTCGACTGAGAACTGGTACGGACAAGGGGAATCC
GACTATTTAATTAAAACAAAGCATTGCGATGGTCCTCGCGGATGCTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAAC
CAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCC
CACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGACCGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGA
CTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCACGGGCGCATGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGGGTC
GGAAGCGGGGCATGTCCCCTCCTTTTGGCTCCAAGGCCCGGTCTTACCGAGCCGATCTGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGC
ACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTC
CAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGATCTTCGGAGTTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGC
TTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTTAAGCAGAATTCACCAAGTGTTGGATTGTTC
ACCCTCCAATAGGGAACGTGAGCTGGGTTTAGACCATCGTGAGATAGGTTAGTTTTACCCTACTGATGACAGTGTCGCGATAGTAATTCAACCTAGTACG
AGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTC
AGAATCCAAGCTAGCATGCGACACCTGCGCCCGCCGCCCGCCCCGACCCACGTTAGGGGCGCTTGCGCCCCCAAGGGCCCGTGCCATTGGCTAAGCCGGT
CCGGCCGACGTGCCGCGGCCGGCCGCCTCGAAGCTCCCTTCCCAACGGGCGGTGGGCTGAATCCTTTGCAGACGACTTAAATACGCGACGGGGCATTGTA
AGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATCCAGCCCCATGTCGCACGGATTCGTCCC