Detailed information on CNT30383589


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 1e-152

BLAST vs NONCODE:
NONBNAT007398, E-value = 2e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641326Triticum turgidumNymphaea colorata69.5147.3684.88529forward
CNT30534416Triticum turgidumEucalyptus grandis80.9554.7184.9616forward
CNT30616124Triticum turgidumSesamum indicum79.553.0283.64605forward
CNT30284133Triticum turgidumTriticum aestivum10054.75100761forward
CNT30656190Triticum turgidumTriticum dicoccoides48.3622.59100368forward
CNT30679719Triticum turgidumTriticum urartu55.3254.8999.05421forward
CNT30604592Triticum turgidumOryza punctata82.2662.7987.06626forward

Expression of CNT30383589

Peptides detected in this lncRNA

>peptide 1 (61 aa)
ADQTISPKILVIYTMMLQFEPPIMCAVHRSCLDIWLQLAASERQRLTCRGQSLWQTPMRCC*

>peptide 2 (43 aa)
MACTKKPNIENMARRPFLTSFTLSSANASGSSAKPSGSKLPPG*

>peptide 3 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 4 (38 aa)
MPLDRQPSPVGRSCPRGRVGRLPHRVGRQQCGTPQQRP*

>peptide 5 (31 aa)
MRYPSTAPMSTTWHAQIARMLCACTRLGLPR*

Sequence

>CNT30383589
GGCAGATCAAACCATTTCCCCAAAGATCCTTGTAATTTACACCATGATGTTACAATTTGAACCACCCATTATGTGTGCAGTTCACCGCAGTTGCCTTGAT
ATATGGCTACAACTCGCAGCTAGCGAGCGCCAACGCCTCACTTGCCGGGGACAAAGTTTGTGGCAAACGCCCATGCGTTGTTGTTGACAGGGTCGGAGAG
GTGGTCAGCGAGGTTCTCGAGTGGGCCCTTGCCGGTGACGATGGCCTGCACGAAGAAGCCAAACATAGAGAACATGGCGAGGCGACCGTTCTTGACTTCC
TTCACCTTGAGCTCCGCGAATGCCTCTGGATCGTCAGCCAAGCCCAGTGGGTCGAAGCTGCCCCCGGGGTAGAGTGGGTCGACTACCTCACCGAGTGGGC
CGCCAGCAATGCGGTACCCCTCAACAGCGCCCATGAGCACGACTTGGCATGCCCAGATAGCAAGGATGCTTTGTGCGTGCACGAGGCTGGGGTTGCCCAG
GTAGTCGAGGCCACCCTCGCTGAAGATCTGGGAACCGGCCTTGAACCATACCGCCTCGCCGAACTTGACGCCGTTGCGTGCAAGAAGCTCGGGGAAGACG
CATCCAAGCGCACCGAGCATGGCCCACCGGCAGTGGATCACCTCGAGCTCCCGGTTCTTGGCAAAGGTCTCGGGGTCGGCCGAGAGCCCGGCGGTGTCCC
ATCCGTAGTCGCCGGGGAACTCGCCGGTCAAGTAGCTCGGGGGCTCTCCGGAAAGCGGGCC