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Detailed information on CNT30383425


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30655558Triticum turgidumTriticum dicoccoides69.3410095.79380forward
CNT30719808Triticum turgidumTriticum spelta77.7410095.77426forward

Expression of CNT30383425

Peptides detected in this lncRNA

>peptide 1 (33 aa)
IDQDRWIRGANWFSICCLFAHSFASSFLNLGSE*

>peptide 2 (78 aa)
MRRLVLLIRWVVVMMIACFSSSSCSPRRPASWAPAQLQLQQEQPHAVPHLQPAPHPQLPPQQDILLGCGWWRGKEAKD*

>peptide 3 (65 aa)
SIRIAGSEELTGFPFAVYLHILLPAVSLTWVVSSLVLSICVPIQTQLENRSTETRSFKVEAPYIH*

>peptide 4 (88 aa)
MTVLFYLARARAHAAASATDTLGGGDDDCLLLLILVLASPAGLLGAGSVAAAAGAAARGAALAAGAAPAVAAAARHPPWLWVVAREGS*

Sequence

>CNT30383425
ATCGATCAGGATCGCTGGATCAGAGGAGCTAACTGGTTTTCCATTTGCTGTTTATTTGCACATTCTTTTGCCAGCAGTTTCCTTAACTTGGGTAGTGAGT
AGTTTAGTTCTTAGCATATGCGTTCCGATTCAGACACAGTTGGAGAACAGATCAACAGAGACAAGATCGTTCAAAGTTGAGGCGCCATATATTCATTAGA
AGTGGAGGCATGAGGAGGGACACTGGAACACATGACGGTTTTATTTTATTTAGCGCGCGCGCGAGCGCATGCGGCGGCTAGTGCTACTGATACGCTGGGT
GGTGGTGATGATGATTGCTTGCTTCTCCTCATCCTCGTGCTCGCCTCGCCGGCCGGCCTCCTGGGCGCCGGCTCAGTTGCAGCTGCAGCAGGAGCAGCCG
CACGCGGTGCCGCACTTGCAGCCGGCGCCGCACCCGCAGTTGCCGCCGCAGCAAGACATCCTCCTTGGCTGTGGGTGGTGGCGAGGGAAGGAAGCTAAGG
ACTGAGAGGATGCTGTGAGGAGTGAGGAGGCTGGTGTGCTTGGTGAGG