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Detailed information on CNT30383394


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000432, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283621Triticum turgidumTriticum aestivum67.6810097.92578reverse complement
CNT30240700Triticum turgidumAvena sativa92.0410095.42786forward

Expression of CNT30383394

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKIRRTEYRSRPVVLITASGLQGEQPLANGTM*

>peptide 2 (36 aa)
MGKPILRDGVTPADSAITRIPRKGIGLRFPEPGCGG*

>peptide 3 (38 aa)
RKPGYGAQLRANLEPTKGVGQLRQQDGGHGSRNPLRSV*

>peptide 4 (43 aa)
MEQCRQGKSAKRIRNFGKRIGSEDWARGSRPRTRRLSADCSSCS

Sequence

>CNT30383394
CCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCAATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAAT
CCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAAGTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCCGGCCATCTGGGCGAGCGC
CATGCCCCGATGAGTAGGAGGGCGCGGCGGCCGCTGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAA
TATTCAAATGAGAATTTTGAAGGCCGAAGAGGAGAAAGGTTCCATGTGAATGGCACTTGCACATGGGTAAGCCGATCCTAAGGGACGGGGTAACCCCGGC
AGATAGCGCAATCACGCGCATCCCCCGAAAGGGAATCGGGTTAAGATTTCCCGAGCCGGGATGTGGCGGTTGACGGCGATGTTAGGAAGTCCGGAGACGC
CGGCGGGGGCCTTGGGAAGAGTTATCTTTTCTGCTTAACGGCCTGCCAATCCTGGAAACGGTTCAGCCGGAGGTAGGGTCCAGTGGCCGGAAGAGCACCG
CACGTCGCGCGGTGTCCGGTGCGCCCCCGGCGGCCCATGAAAATCCGGAGGACCGAGTACCGTTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCC
AAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAACGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGACTGGGCTC
GGGGGTCCCGGCCCCGAACCCGTCGGCTGTCGGCGGATTGCTCGAGCTGCTCAC