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Detailed information on CNT30383362


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30314095Triticum turgidumCamelina sativa21.487.3395.45110forward
CNT30726123Triticum turgidumLupinus angustifolius34.185.2896.57175reverse complement

Expression of CNT30383362

Peptides detected in this lncRNA

>peptide 1 (29 aa)
SPQSKTPPWYAPIRPPKAFVALVVHRSHG*

>peptide 2 (31 aa)
MFPSCREQSELRQSFRIRSALQPCFPLSLPL*

>peptide 3 (43 aa)
TPVEDPTVVCANKTTKGLCGTSGTQKSWVIIGPMLRAKPIPRV*

Sequence

>CNT30383362
TCACCCCAGTCGAAGACCCCACCGTGGTATGCGCCAATAAGACCACCAAAGGCCTTTGTGGCACTAGTGGTACACAGAAGTCATGGGTGATCATTGGTCC
GATGCTTCGGGCGAAACCAATTCCTAGGGTGTGACAGGCGGTATGTACAGGGCCCGGGTACATATTCACCGCGGCATGCTGATCCACGATTACTAGCGAT
TTCAACTTCATGTTCCCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGGATTCGCTCCGCCTTACAGCCTTGCTTCCCATTGTCATTGCCAT
TGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCACTGGCAGTCCCTCGTGAGTGCGGCAC
GCACCTTTTTCTTTGTTTCGGAGCGGGGCGCGTACTATTACCACTACGTTCCACACCATTTTCTGGCCTTCATGCCGAGTCTTCCTCCGCCGCCAACTCT
ACGTCGTCGTAA