Detailed information on CNT30383337


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000078, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30585745Triticum turgidumMusa acuminata67.0994.693.381103forward

Expression of CNT30383337

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPREWAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 2 (98 aa)
MEQCRQGMSAKRICNFGKRIGSEDWAQGSRPRTRRLSADCSSCSRGESGSPRAGRGTDRESPLRGLSPSMKQSTQNWYGQGESDCLIKTKHCDGPRGC*

>peptide 3 (40 aa)
GRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR*

>peptide 4 (41 aa)
MSPPFGSKARSYRADPGGRHCQVGSLAGAAHLLKDNAGVLR*

>peptide 5 (49 aa)
AGRAPHVARCPVRPRRPMKIRRTEYRSRPVVLITASGLQGEQPLANGTM*

>peptide 6 (54 aa)
MRRLRPPPAPTHVRGACDPKGPCHWLSRSSRHAAAGRLEAPFPTGGGLNPLQTT*

>peptide 7 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

Sequence

>CNT30383337
TGGCCGGAAGAGCACCGCACGTCGCGCGGTGTCCGGTGCGCCCCCGGCGGCCCATGAAAATCCGGAGGACCGAGTACCGTTCACGCCCGGTCGTACTCAT
AACCGCATCAGGTCTCCAAGGTGAACAGCCTCTAGCCAATGGAACAATGTAGGCAAGGGATGTCGGCAAAACGGATCTGTAACTTCGGGAAAAGGATTGG
CTCTGAGGACTGGGCTCAGGGGTCCCGGCCCCGAACCCGTCGGCTGTCGGCGGATTGCTCGAGTTGCTCACGCGGCGAGAGCGGGTCGCCGCGTGCCGGC
CGGGGGACGGACCGGGAATCGCCCCTTCGGGGGCTTTCCCCGAGCATGAAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTA
AAACAAAGCATTGCGATGGTCCTCGCGGATGCTGACACAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTGAACCAAGCGCGGGTAA
ACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTC
TACTATCCAGCGAAACCACAGCCAAGGGAATGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGA
CTTGACAGGTGTAGGATAAGTGGGAGCCCTCACGGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTCACTTATTCCGTGGGTCAGAAGCGGGGCAT
GTCCCCTCCTTTTGGCTCCAAGGCCCGGTCTTACCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAA
GATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACG
AACCGTGAAAGCGTGGCCTATCGATCCTTTAGATCTTCAGAGTTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAA
GCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGG
GAACGTGAGCTGGGTTTAGACCATCGTGAGATAGGTTAGTTTTACCCTACTGATGACAGTGTCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTG
ATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTA
GCATGCGACGCCTGCGCCCGCCGCCCGCCCCGACCCACGTTAGGGGCGCTTGCGACCCCAAGGGCCCGTGCCATTGGCTAAGCCGGTCCAGCCGACATGC
CGCGGCCGGCCGCCTCGAAGCTCCCTTCCCAACGGGCGGTGGGCTGAATCCTTTGCAGACGACTTAAATACGCGACGGGGCATTGTAAGTGGCAGAGTGG
CCTTGCTGCCACGATCCACTGAGATCCAGCCCCATGTCGCACGG