Detailed information on CNT3038331


BLAST search results

BLAST vs Swiss-Prot:
sp|O04681|PTI5_SOLLC, E-value = 3e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516842Cucumis meloJuglans regia29.4527.4481.88149forward
CNT30379120Cucumis meloManihot esculenta30.0418.5682.24152forward
CNT30170287Cucumis meloPistacia vera29.4515.9782.55149forward
CNT30344350Cucumis meloEragrostis tef21.9414.3882.88111forward
CNT30362892Cucumis meloSorghum bicolor29.2519.7683.11148forward

Expression of CNT3038331

Peptides detected in this lncRNA

>peptide 1 (62 aa)
TGLRYGEVIGSSIIIIQTTKQSREAHPRRRSSRDRPPLVLQPDSSPSIDRRASFTPNLFGGE*

>peptide 2 (65 aa)
MRVKLRNGSLNGICIIFIREIDLSFLSTNLASFSIVSSSGFLSSIESPKPDTDPLPGVTNLSRPFS

Sequence

>CNT3038331
ACCGGTTTGAGATATGGAGAAGTTATTGGATCATCAATCATCATAATTCAGACGACGAAACAGAGCCGTGAAGCCCATCCTCGTCGTCGAAGCTCCAGAG
ATCGCCCACCACTTGTTCTTCAGCCGGATTCGTCACCGTCGATTGACCGTCGAGCCTCTTTCACACCGAATCTTTTCGGTGGAGAATAAGAATCCTCCGA
CCCAGAGCCGGATTGTTCCTCAATCGCCACGGGAAAGTGAGTGCCGGTGAAATCACCGATTTGGTTGAGATCGTAGGGGAATTCGGAATTCTCAGGGACA
GTGTAAAGATGAGGGTGAAATTGAGGAATGGGAGCTTGAATGGAATATGCATCATCTTCATTAGGGAAATTGACCTTAGCTTTCTTTCCACGAATCTTGC
GAGCTTCTCGATCGTAAGCTCGAGCGGCTTCCTCAGCAGTATTGAAAGTCCCAAGCCAGACACGGATCCCCTTCCTGGGGTCACGAATCTCAGCCGCCCA
TTTTCC