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Detailed information on CNT3038324


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 7e-13

BLAST vs NONCODE:
NONVVIT003032, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670969Cucumis meloSetaria viridis53.9289.1398.031017forward
CNT30524649Cucumis meloSetaria italica62.9936.0497.91188reverse complement
CNT30641383Cucumis meloNymphaea colorata69.4641.9394.581310reverse complement
CNT30550219Cucumis meloIpomoea triloba75.3432.7397.541421reverse complement
CNT30702366Cucumis meloQuercus lobata52.8110097.99996forward
CNT30378673Cucumis meloArabidopsis thaliana34.3651.9697.38648forward
CNT30618996Cucumis meloSesamum indicum42.116.796.22794reverse complement
CNT30283003Cucumis meloChenopodium quinoa48.8396.4496.42921forward
CNT3020470Cucumis meloCitrullus lanatus18.2463.8298.26344forward
CNT30632346Cucumis meloVigna unguiculata69.6746.9897.791314reverse complement
CNT30504586Cucumis meloNicotiana attenuata79.885.4695.811505reverse complement
CNT30712072Cucumis meloGlycine max17.0750.7992.55322reverse complement
CNT30162096Cucumis meloPistacia vera6.6342.0998.4125forward
CNT30637481Cucumis meloCapsicum annuum21.1689.0695.49399reverse complement
CNT30185187Cucumis meloSecale cereale69.7237.1897.341315reverse complement
CNT30299053Cucumis meloTriticum aestivum69.7236.797.031315reverse complement
CNT30221833Cucumis meloHordeum vulgare48.9467.6295.77923reverse complement
CNT30394721Cucumis meloTriticum turgidum69.7235.997.341315reverse complement
CNT30569654Cucumis meloActinidia chinensis75.6640.7696.431427reverse complement
CNT30543278Cucumis meloBrassica napus41.3628.8996.41780reverse complement
CNT30508923Cucumis meloSolanum lycopersicum15.9690.1298.34301reverse complement
CNT30147396Cucumis meloMedicago truncatula71.7445.4897.041353reverse complement
CNT30438197Cucumis meloAegilops tauschii54.1997.6197.851022reverse complement
CNT30258490Cucumis meloAvena sativa19.4150.6998.36366reverse complement
CNT30660235Cucumis meloTriticum dicoccoides49.95100.1197.13942forward
CNT30140161Cucumis meloLolium perenne69.7238.6397.641315reverse complement
CNT3017954Cucumis meloZea mays70.0434.8696.91321reverse complement
CNT30605146Cucumis meloGossypium raimondii69.385.5994.411307forward
CNT30216563Cucumis meloKalanchoe fedtschenkoi83.440.4595.31573reverse complement
CNT3067980Cucumis meloLeersia perrieri8.5453.4996.27161forward
CNT30655407Cucumis meloRosa chinensis76.6743.2595.781446reverse complement
CNT30202530Cucumis meloHelianthus annuus35.2190.5996.84664reverse complement
CNT30715685Cucumis meloMalus domestica golden15.1623.588.46286forward
CNT30628241Cucumis meloDaucus carota69.9448.8597.81319forward
CNT30682011Cucumis meloTriticum urartu51.75100.197.85976reverse complement
CNT30721631Cucumis meloTriticum spelta69.7237.8697.191315reverse complement
CNT30346087Cucumis meloEragrostis tef38.1269.5497.5719reverse complement
CNT30595568Cucumis meloOryza meridionalis8.6442.0193.87163forward
CNT30359771Cucumis meloLactuca sativa45.5582.298.02859reverse complement
CNT30369921Cucumis meloOryza glumipatula12.0498.796.92227reverse complement
CNT30484250Cucumis meloChara braunii10.0226.0394.18189forward
CNT30429739Cucumis meloPapaver somniferum69.0940.593.551303reverse complement
CNT30571858Cucumis meloVitis vinifera76.5641.6697.851444forward
CNT30644906Cucumis meloCannabis sativa7.2642.8194.89137forward
CNT3056076Cucumis meloAmborella trichopoda62.255192.161174reverse complement
CNT30320583Cucumis meloAsparagus officinalis14.1624.3498.13267reverse complement
CNT30118993Cucumis meloCitrus clementina14.4877.5694.14273reverse complement
CNT30331625Cucumis meloDioscorea rotundata12.4173.5896.58234reverse complement
CNT30151167Cucumis meloBrachypodium distachyon6.220.0398.29117forward
CNT30499372Cucumis meloDigitaria exilis65.0136.0797.881226reverse complement
CNT30603680Cucumis meloOryza punctata69.7233.3297.571315reverse complement
CNT30557400Cucumis meloPanicum hallii33.5646.1496.68633reverse complement
CNT3039925Cucumis meloMarchantia polymorpha17.3465.9394.8327reverse complement

Expression of CNT3038324

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MCRFPKKKIGEHPFSRSYGVILPSSFDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQKEVFSWKFQPCSL*

>peptide 2 (53 aa)
MRKACRLVRLNETFENESAHSQVLRKVSAGARSRSPPRPLGRVKAHFRVKAFR*

>peptide 3 (37 aa)
MGKVQVLSFSTRSLNTSRCLHLSPIEVMFKNLVRELV*

>peptide 4 (33 aa)
DLLIPALSKLGQGPCIGWSFKADLIIREKGLLN*

>peptide 5 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

Sequence

>CNT3038324
GGACCTCTTGATTCCAGCGCTTAGTAAGCTAGGCCAAGGCCCTTGTATAGGTTGGAGCTTCAAAGCGGACCTGATTATTAGAGAGAAAGGGCTTTTGAAC
TAGCAGCTAAATTCAGTCTTTGAGACCCCATAACATAAGAAAGTCGTGGAGTGCATAAGCCCCAGATAGGAGCTACTTTCTTGTGGTATTCGAATGAGCA
AGTAGGGGGCGGCAACTAAAGAGGTAGCGAGACTGACCGCAATTGCAGGAATAGGTTGACTTTCTTTCATTTTGGTTATGGGGAAAGTGCAAGTCCTTTC
GTTTAGTACGAGATCGCTGAACACCTCGCGGTGCTTACACCTCTCGCCTATCGAAGTGATGTTCAAAAACCTCGTCCGAGAACTTGTATAGAGAAGGATT
TCCCGCGGCGCAGCGGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAACCCAGTCCTCTCG
TACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTCACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTCA
TCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCAATAAGAGCTCTTGGGAGT
CATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGAACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGAC
CAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTGAGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCA
TCCGCCCCAGATAAACTACCCACCTTGCAGTGTCCCGCCCCCCCCCGAAAACTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGA
TTGGTCGTTGTGTGTCACCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTGAAGGTGCACGGGGTCTTACCGTCTAGC
CGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTGACACCATTCGTGCAGGTCGCTACTTATG
CGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATCACACTTCTCCTTCCGACCTTCCAG
CACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA
AGAAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTG
TTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGATCGCCCTCCCAAAAAGAAGTTTTTTCCTGGAAGTTTCAACCTTGTTCACTATGACAA
GAGTCGCGACTATAAACAGACTCACGACTATGGCGGTACGCTCTCTCGGGACCCCTACTCAAAGGCGAGCACTGGAATGAGAAAGGCTTGTAGACTCGTG
AGGCTGAACGAGACATTCGAAAACGAAAGCGCACACTCTCAAGTGCTGAGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAGCCCGCCTCGCCCGCTGGGCC
GAGTCAAAGCCCACTTCAGAGTCAAAGCCTTTAGATAACAAAAAAAGGTGTCCGCCCCCCACGTAGCGGTCGCCAAACGGAGACGA