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Detailed information on CNT30383171


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30178572Triticum turgidumSecale cereale33.3936.0993.23192forward
CNT30285390Triticum turgidumTriticum aestivum24.5238.1196.45141forward
CNT30435028Triticum turgidumAegilops tauschii25.5747.2795.24147forward
CNT30655869Triticum turgidumTriticum dicoccoides26.2648.4100151forward
CNT30679989Triticum turgidumTriticum urartu36.8743.9898.58212forward
CNT30368187Triticum turgidumSorghum bicolor12.1728.5785.7170forward

Expression of CNT30383171

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MGSRSGEAGRTASLRPEMELPARPRTATGWTATSDAIAIELYVRIPWACPGSGAAGYVHTL*

>peptide 2 (44 aa)
RQVLPPFWITCRRYGGSSNLNRQYSKNMVLQKTVLAIVKEQMIY*

Sequence

>CNT30383171
AGGCAAGTACTCCCTCCGTTCTGGATTACTTGTCGCAGGTATGGAGGAAGTAGTAATTTAAACCGCCAGTACAGCAAAAACATGGTACTGCAAAAAACAG
TACTGGCAATCGTCAAAGAGCAAATGATCTACTAGTAGTAATTGCATGCATCATGCAAGCAGCATCTTTCCAATTACTGATACGAAGTAGTACAAAGATC
AAGTATCAACAGAGGACATAGATAGGGCCATAGGGGGGAATCCATCAGATTCACGGTACACAAGCACGAGGCGAGAGGAGGAAGAAGGCCTTGATTGCAG
ATCTACTTAGATCTTGCCACGTGGCCCCGGGGTGGGGGGCAGCTGGGGCCCCTTCTTGATGGGGAGCAGGTCGGGGGAGGCGGGCCGGACGGCGAGCTTG
CGGCCGGAGATGGAGCTGCCGGCCAGGCCCCGCACGGCGACCGGCTGGACGGCGACGAGCGACGCCATTGCGATCGAGCTGTACGTGCGTATACCGTGGG
CGTGTCCTGGTTCTGGAGCTGCGGGGTACGTGCACACACTTTGATCAGTGGATGCTGTTAAGGATTTGAAACGGC