Detailed information on CNT30383121


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000393, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618591Triticum turgidumSesamum indicum82.6661.7292.94453forward
CNT30283133Triticum turgidumChenopodium quinoa84.4956.4692.87463forward
CNT30285966Triticum turgidumTriticum aestivum70.44100.2697.15386reverse complement
CNT30585598Triticum turgidumEchinochloa crusgalli81.3982.1496.41446reverse complement

Expression of CNT30383121

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MQPKSSGRLRPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 2 (39 aa)
NDPANEAHVASTATPGQAGLPAEFKHINKRRRRNLQGFP*

>peptide 3 (28 aa)
MGAGDAPRPYAERLLLVRRSARGVDCCRP

Sequence

>CNT30383121
AATGACCCAGCAAACGAAGCACACGTCGCTTCGACCGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATAAATAAGCGGAGGAGAAGAA
ACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAGCAGCCCAGCTTGAGAATCGGGCGGCTGTGCCGTCCGAATTGTAGTCTGGAGAGGCGTCC
TCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACG
AGTCGGGTTGTTTGGGAATGCAGCCCAAATCGAGCGGTAGACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAA
GATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGCCGTATGCGGAACGAC
TCTTGCTGGTCCGCCGCTCGGCTCGGGGTGTGGACTGTTGTCGGCCGT