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Detailed information on CNT30383102


BLAST search results

BLAST vs Swiss-Prot:
sp|P33628|TBA_PICAB, E-value = 4e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317272Triticum turgidumCorylus avellana54.6141.1384.38160forward
CNT30372848Triticum turgidumArabidopsis thaliana48.8123.8389.51143forward
CNT30493173Triticum turgidumOlea europaea46.4232.9383.82136forward
CNT30562914Triticum turgidumActinidia chinensis55.9753.9583.54164forward
CNT30555317Triticum turgidumOryza glaberrima27.9928.6791.4682forward
CNT3079816Triticum turgidumBrassica juncea38.5741.0991.15113forward
CNT30135921Triticum turgidumLolium perenne51.1939.8994150forward
CNT3065Triticum turgidumZea mays60.4172.5490.4177forward
CNT30609153Triticum turgidumGossypium raimondii54.6139.5184.38160forward
CNT30648424Triticum turgidumRosa chinensis5752.0287.43167forward
CNT30129276Triticum turgidumCorymbia citriodora44.0330.8689.15129forward
CNT30721383Triticum turgidumTriticum spelta92.1510094.81270forward
CNT30361585Triticum turgidumSorghum bicolor35.1527.4796.12103forward
CNT30579614Triticum turgidumEchinochloa crusgalli5742.2891.62167forward
CNT30496537Triticum turgidumDigitaria exilis21.527.8888.8963forward

Expression of CNT30383102

Peptides detected in this lncRNA

>peptide 1 (96 aa)
LRNKPVEVGVCWALNVKGAAADVIDGLIVKKDRHISLLRVEELAVSASPHLINHSGLEIYEDSTGDVLPSPSLAEEGVESIITSPNGLVTGHLAIRL

Sequence

>CNT30383102
ACCTGAGAAACAAGCCTGTTGAGGTTGGTGTATGTTGGGCGCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGCCTCATTGTCAAGAAGGATAG
ACACATCAGTCTGCTCAGGGTGGAAGAGCTGGCGGTAAGCGCCAGTCCTCACCTCATCAATCACAGTGGGCTCGAGATCTACGAAGACAGCACGGGGGAC
GTGCTTCCCAGCCCCAGTCTCGCTGAAGAAGGTGTTGAAAGCATCATCACCTCCCCCAACGGTCTTGTCACCGGGCATCTGGCCATCAGGCTG