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Detailed information on CNT30382812


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283705Triticum turgidumTriticum aestivum51.0322.9399.07321forward
CNT30656215Triticum turgidumTriticum dicoccoides51.0344.2899.07321forward
CNT30719891Triticum turgidumTriticum spelta61.3775.6999.74386forward

Expression of CNT30382812

Peptides detected in this lncRNA

>peptide 1 (38 aa)
IRHPSDSGELLRLGSGSSLFSGHRNTLLRQTSWTAPEP*

>peptide 2 (47 aa)
GSATLATPASSSASDPAVPSSPATATHFSGKPRGPRPNPRSEVPLFH*

Sequence

>CNT30382812
GGATCCGCCACCCTAGCGACTCCGGCGAGCTCCTCCGCCTCGGATCCGGCAGTTCCCTCTTCTCCGGCCACCGCAACACACTTCTCCGGCAAACCTCGTG
GACCGCGCCCGAACCCTAGATCTGAGGTTCCATTATTTCACTGAAGTGAGCTCCATGAGAGAGGATTCCACAAGGTGAGGTCCGCCGTGAGGGGTGGCCA
ATGATGTGAGGGAGCAGCCGCGACCAGCGCTAGCAGACTCCAACGCGCCCAAGCCCCGGCCAAGGCTATAGCAGCTGCTTTCGCGTGCCGTCGTTCCCCT
CCAGCAGATCCCTGGGAGAAGGCGGGGAACTGCAGGGCGTCCGACCGGCTGGGTGAAGCGCCGCTTCGCCGTGATGTCGCAGGAGGTCGTATAGGCGCAC
ATCAAGATGGCGTACATCACCATTACGGCCACCTTTTCTGCTCAGGTAAAAACTAACTTCCTTCGGCGTTCGATGAATCTGTAGACTGTTTTGTGAGCTA
CAGTGGTTGCTACTATGCTAATAGCAGAAGTCTGGTGGGCAGTGTTGATAATTAGTAGCACTAATTAGTGGCTGGGACTGCTCCAATTATCCAGCTGGTT
ATATTGTACGTAGTATAAAATACTTGGTT