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Detailed information on CNT30381846


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30662869Manihot esculentaTriticum dicoccoides20.0720.1391.861forward
CNT3017048Manihot esculentaZea mays21.0519.2289.0664reverse complement
CNT30128358Manihot esculentaCorymbia citriodora26.9729.7190.2482reverse complement

Expression of CNT30381846

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MAILWLAHSKPGVEPRDSIVRWSFLGLRVESTA*

>peptide 2 (48 aa)
PSQLTWACNPSGVYEVVGRCSNPDGWIRGWLFSGSPIPSRELNQETRS*

Sequence

>CNT30381846
GCCGAGCCAGTTGACGTGGGCTTGTAACCCAAGTGGGGTCTATGAAGTGGTGGGACGTTGCTCCAACCCAGATGGCTGGATACGGGGATGGCTATTCTCT
GGCTCGCCCATTCCAAGCCGGGAGTTGAACCAAGAGACTCGATCGTAAGGTGGAGTTTCTTGGGTCTTAGAGTGGAGAGTACCGCGTGAGGCTGGCTTCA
CAGAGCAGCGACTATCTCCCGCTTCCGGCAGTGGAAGGATAACGAGTTGGTGTTACCCGGTTCCACATAGCCAGATGGACTGTTCTAATTGGACCACCAC
TTTT