Detailed information on CNT30381731


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST002027, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30726334Manihot esculentaLupinus angustifolius4.6622.4983.5103forward

Expression of CNT30381731

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MYVQVNRKSGGPTIFFRPEIIAFRVAVACLLKMTKFFLVSPTID*

>peptide 2 (37 aa)
MWWSQLADALLKMYWDSCYVCTHLHDLLLLSWSLSRI*

>peptide 3 (37 aa)
MQWILIIQVALTHLVQKPLDVCTSQQEIWWTHYFLSS*

>peptide 4 (69 aa)
MIGTQLTISDTPVLGGFFSDGGNGMGLITMPEPFSISKGTVEVNILFSSGPGSASLALQNTEVTFSFIL*

>peptide 5 (62 aa)
MALAPILFEIVLSLHRNWLLEEARLCVALEWWFSNSVSPSCLICKSDFVLNFMLVLLIESAA*

>peptide 6 (47 aa)
KKFYPSLVQISNPPFSIILENQSPLSVPIYNQPNQSRDVGSFWIQSN*

>peptide 7 (46 aa)
MLKFSTVARAARFWMFMDLLVSSIFSMHAVDPDNTGCFDTSCPEAT*

>peptide 8 (40 aa)
MFAGKEIWSIPSAQGCCILISVALALTFELPICTSFVEAS*

>peptide 9 (38 aa)
KNSILLLYKYQIPHSQLYWKINLLFLFLFTINLTNLGM*

>peptide 10 (32 aa)
KILSFSCTNIKSPILNYIGKSISSFCSYLQST*

>peptide 11 (36 aa)
MKKLLEGYDYETLQCLSCLSMRSQSLFDILLIRSAS*

Sequence

>CNT30381731
AAAAAATTCTATCCTTCTCTTGTACAAATATCAAATCCCCCATTCTCAATTATATTGGAAAATCAATCTCCTCTTTCTGTTCCTATTTACAATCAACCTA
ACCAATCTAGGGATGTAGGCAGCTTCTGGATTCAAAGCAACTAAAGCCTTGGACATGTCGCATTCTTGAACTTCCATGTTTGCTTGCATGTGTTGCTGGC
TCTTCAATGATAGGTACACAACTGACAATATCTGATACTCCTGTTTTAGGTGGATTCTTCTCGGATGGAGGTAATGGCATGGGATTAATAACTATGCCAG
AGCCTTTCTCCATTTCTAAAGGAACAGTTGAAGTCAACATACTCTTCTCTTCTGGCCCAGGTAGCGCAAGCCTTGCACTGCAAAATACAGAGGTCACATT
CAGCTTCATTCTCTGAAGTATTAATCTTATGGATACTGGAAACAAGCTGCATCCTGTGCCCCTTGTACAACCCTTTTGCTCGTGCAACTTGCATCTTTTT
CCTTGTTGAATCTGGAGGCACTTGAAGGCCAAGAAGATATGCTCTTTTCTCTGTTCGGTCCAACACAATCCACTTCTACCATCTCAGATTGTGCAGTTGT
GCACAACTGATAGTTACAAGAAGGAAGTACTGGTACTTGCATCTGAGGATTATTGTAAATAATTTGCTGATAAAACGCAGAAGAGCCATGTGGTGGTCTC
AACTTGCGGATGCTTTGTTAAAAATGTACTGGGACTCTTGCTATGTCTGTACTCATTTGCATGATCTTCTGCTTCTGAGTTGGAGCCTGAGTAGGATCTG
ACTCCACCATTGCTTTGAATAACTGAGGAATCAAAGGAATCTTGTGATGAAAAAACTTCTGGAGGGCTATGACTACGAGACTCTACAATGCTTGTCCTGT
CTGTCCATGAGGTCTCAGAGTCTCTTTGATATTCTGTTGATTCGCAGTGCGTCGTAGAGTTCTGCTTATAGAAAGGGTGTTGTAACAACTTCTCATTCCA
TTTGATTGAGTCAAACAGAATTATTGCCCCATCTCTCTCACAGGTTATGTTTCTTGTTGACTTACGAGGAAATCTTGCAGCTAGAGACATGAAGGCGGAG
CTGCATGAAGGGTAAGTAGTTGAAGAGAAGGTTTAGTTTCTGCATCAATCAGTATTACTGCCAATAGTTTGAATTTAATGATCCCGGAATTTACCTTGAA
AGGTGGTCTGAAACATTTTGAGTAAGGAAGACTCCTATCACTGAATCAACAACTGATCCCTTCCATTTTGAGAAGCGCCTATCTCCTGTAGAGTTATTGC
ATTCATACATTAAGGTGATTGGTGATCTTGCAAGATGTCCATACGTATTTTTCGCATTTTGCCTTCTCTAAATGGAACAGATTTGGATTGAGAAGACCCC
ACTGCCTGCTTTATTGACACATTGATGTTGGAAGTTTTAGGATGTAGTTGGTCTACAGGTTGAGGGCCTGTTTTTTGAGGACTAGGTGGAAGCATGTTAA
AGTTCTCAACTGTGGCTAGGGCAGCAAGGTTTTGGATGTTCATGGATCTTTTGGTGTCTTCAATCTTTTCCATGCATGCAGTGGATCCTGATAATACAGG
TTGCTTTGACACATCTTGTCCAGAAGCCACTTGATGTATGTACAAGTCAACAGGAAATCTGGTGGACCCACTATTTTCTTTCGTCCTGAAATTATAGCTT
TCCGTGTTGCAGTGGCTTGTCTGCTCAAAATGACCAAATTCTTTCTTGTATCCCCTACCATCGATTAAATGTTGTGAAATCTCCGCAACTGATTGAGTAT
TCTGTGGCATCATTTGTCTGGTTCTCTCCAGGTTTTTGCAAATAATGTTTGCTGGAAAGGAAATTTGGTCAATTCCTTCTGCACAGGGATGCTGCATTCT
GATATCTGTTGCTTTAGCATTGACATTTGAATTGCCTATTTGCACTTCTTTTGTTGAAGCTAGTTGAACTGCAGCTTCTCTTCTGTCTGATTTTGGAATG
GCTCTGGCTCCTATTCTGTTTGAAATTGTGTTGTCATTGCACAGAAATTGGTTGCTAGAAGAGGCCAGGTTATGTGTTGCTCTTGAATGGTGGTTTTCTA
ACAGTGTCTCACCATCTTGTCTCATCTGCAAATCTGACTTTGTTCTGAACTTCATGTTAGTTTTGTTGATTGAATCTGCAGCTTGAAAAGATTTACCAGA
ATTGCAAGACCC