Detailed information on CNT30381694


BLAST search results

BLAST vs Swiss-Prot:
sp|P51819|HSP83_IPONI, E-value = 2e-122

BLAST vs NONCODE:
NONSTUT001022, E-value = 2e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517898Manihot esculentaJuglans regia77.152.8281.8478forward
CNT30729348Manihot esculentaCorchorus capsularis82.5856.5782.42512forward
CNT30158908Manihot esculentaPistacia vera80.1630.4282.7497forward
CNT30212676Manihot esculentaHelianthus annuus36.6163.9485.02227forward
CNT30624770Manihot esculentaDaucus carota55.3254.2782.22343forward
CNT30558289Manihot esculentaPanicum hallii25.4826.9282.28158forward
CNT30113681Manihot esculentaFicus carica82.970.682.88514forward
CNT30724682Manihot esculentaLupinus angustifolius35.4889.882.73220forward

Expression of CNT30381694

Peptides detected in this lncRNA

>peptide 1 (32 aa)
LCSGCPHGYPILDSLRKPHRTCCNLPYSQQFH*

>peptide 2 (57 aa)
MHFFTRFFLMTLRILFCWSISREMLRGRSSESTTPFTKLRYSGISSSQLSIIKTLLT*

Sequence

>CNT30381694
CTCTGTTCTGGCTGTCCTCATGGATACCCAATTTTAGATTCTTTGAGAAAGCCTCATAGAACTTGTTGTAATCTTCCTTATTCTCAGCAATTTCATTGAA
CATCTCAATGCATTTCTTCACAAGATTCTTTCTGATGACTTTGAGGATTTTGTTCTGTTGGAGCATCTCACGTGAAATGTTAAGAGGCAGATCATCAGAA
TCAACGACTCCCTTCACAAAGCTAAGGTACTCCGGTATTAGCTCCTCACAGTTGTCCATAATAAAGACTCTCCTGACATAAAGCTTGATATTGTTCATTT
TCTTCCGCGTGTCAAAGAGATCAAATGGAGCCCTCTTTGGTACGAAAAGGATAGCCTTGAATTCAAGTTGACCCTCAACAGAGAAATGCTTGACAGCTAG
GTGGTCTTCCCAATCGTTGGTCAAGCTCTTATAGAAAGATGCATATTCCTCCTTGGTGATCTCCTCCGGCTTGCGCAGCCAGATGGGCTTCTGCTTGTTA
ATAAGCTGCCACTCGTAGATGGGATAACTAATGAACTCAGAGTGCTTCTTCACAAGGTCCTTAATCCTCCTCTCTTCCAAGTACTCAAGCTGCAAATAGA
AAAGTAACACACAACATCAG