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Detailed information on CNT30381526


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287901Manihot esculentaTriticum aestivum11.1427.9286.4974forward
CNT30224742Manihot esculentaHordeum vulgare13.438.0384.2789forward
CNT30229741Manihot esculentaAnanas comosus24.5528.480.37163forward
CNT30655297Manihot esculentaRosa chinensis32.8339.4288.07218forward
CNT30102429Manihot esculentaOryza rufipogon23.9522.3679.87159forward
CNT30112309Manihot esculentaFicus carica14.7631.5182.6598forward

Expression of CNT30381526

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MWDSYNNHNNNNTTSFSLPCGNNSSKASAVVSVPITQINSVYSMRTSPTIHLLSYIPRRTRIFNRIMAHRLAANTDMLITVQTTFFQKGAIRLG*

>peptide 2 (31 aa)
MQRKAYQTEAPTTHTRYLLHSRHQQLLLSGL*

Sequence

>CNT30381526
CTGGTAATTACAAAAACGTTACAGTGTAGGCACATGATTTTGCCTTGTTCACAGATAGCGGGATAAACCCACTTTTATTAAATCAAATGGAGAGAGAAAG
AGATGTGGGACAGTTATAATAACCATAATAATAATAATACTACCTCCTTTTCCCTTCCCTGTGGAAATAATTCTAGTAAAGCATCTGCTGTAGTCTCTGT
TCCAATAACACAAATAAATTCAGTCTACAGTATGCGAACCTCACCAACCATACATCTTTTATCTTACATACCACGGAGAACACGTATTTTCAATCGAATA
ATGGCCCATCGTTTAGCAGCAAATACCGATATGCTAATTACAGTCCAAACCACATTCTTCCAGAAGGGGGCCATCCGACTTGGCTAGGAATGGATCTATA
CGAACCCACAGAAGGGAGAAGATGGAGGCAAGCAAAATTGACCACACAATAATGATTGTGGGAGTTCTGTTCTGCCGACCAAGTAGACCCTTGAGGAAAG
GATAGAGGTGAACTATCACCCAGAATGCAAAGAAAAGCTTACCAAACAGAGGCCCCCACGACTCATACCCGTTATTTATTGCATTCGAGACACCAGCAAC
TACTCCTATCAGGTTTATGATCAGCAGCGTTGTCGGTGGAATGAGCAATGTGGTCCACTTAAAT