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Detailed information on CNT30381490


BLAST search results

BLAST vs Swiss-Prot:
sp|Q42915|RBS_MANES, E-value = 2e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512567Manihot esculentaJuglans regia14.2221.5388.8990forward
CNT3069740Manihot esculentaQuercus suber30.4921.381.35193forward
CNT30402284Manihot esculentaBeta vulgaris9.4827.493.3360forward
CNT30525466Manihot esculentaPhaseolus vulgaris10.4322.2289.3966forward
CNT30605276Manihot esculentaGossypium raimondii13.2721.2791.6784forward
CNT30573761Manihot esculentaVitis vinifera13.2721.8886.984forward

Expression of CNT30381490

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MFDQLIKLLQHLGCICAPKHGQLPHGPVATIVVPWYSCMLTVHQSMLPNQTHT*

Sequence

>CNT30381490
CCTAATTGAACAAAACCCAGAAAGGATAATGTCAACAAATTAAAATTGGGAGAAAATAATTTAAGCGCCAGGAGGCTTGTAGGCAAGGAAACTGATGCAC
TGCACTTGGCGAACATTGTCGAAGCCAATGATCCTAGCATAGCCATCTGGGTGATGTTTGATCAGCTCATCAAGCTCCTTCAACACCTGGGCTGCATCTG
TGCACCCAAACATGGGCAGCTTCCACATGGTCCAGTAGCGACCATCGTAGTACCCTGGTACTCTTGCATGCTCACGGTACACCAATCCATGCTTCCAAAC
CAAACACATACGTAAGTCACTCATGCAATTGCGTGTTGAATTATTAACAAATTTTAAGATTTTGTTTTGAGATCACCTCTAGCTCGAATTCCAAGCAAGG
AATCCATCCAGAACGAAGAAGGTATTCAACTTCGCTGGCCAATTGCTCCCTTGTAAGTGGTGGAAGGTGATGTCAGAGTTGGTTTTGCGGGTGGTAGGGA
AGACTGGGGTGGACTTAAGGCCGGTGAACGGAGCCACCATAGTAGCCTGAGCAGGGCTGACCCTGTTAATGCTAGCCACAGTAGCAGTTGAGAGCATAGA
GGAAGCCATTTTTTTACCTCCCTTTACTTTCTT