Detailed information on CNT3038142


BLAST search results

BLAST vs Swiss-Prot:
sp|P04165|CYB_MAIZE, E-value = 4e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548225Cucumis meloIpomoea triloba54.7230.5896.29377forward
CNT30378677Cucumis meloArabidopsis thaliana63.7216.0294.31439forward
CNT30619453Cucumis meloSesamum indicum34.2533.8195.76236forward
CNT30180581Cucumis meloSecale cereale62.5519.3693.97431forward
CNT3088309Cucumis meloVigna radiata29.7525.5389.76205forward
CNT3082246Cucumis meloBrassica juncea42.2435.0294.85291forward
CNT30688824Cucumis meloTriticum urartu57.7627.5494.22398forward
CNT30481172Cucumis meloChara braunii16.2633.6384.82112forward

Expression of CNT3038142

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MIFALVFPTQGKTFFSLSFYRLSPHTLTEGKNLRTPMNKSSPPYFTILR

Sequence

>CNT3038142
TCACAATCATGAATAGGAAGATGAGAACTTCGAGACACCAAACAAATTCCCTAAGGCTGCTATAACTCGCATGATATAGACCACGAAAAATATGAAGGTG
AACCACAATGAGAAACATACTTGCCCCATTAGCATGCATATAACGGAGCAACCAGCCCCCTGAAACATCTCTCATAATGTGTTCTACGCTGTTGAAAGCT
AGATCCACATGAGGTGTGTAATGCATAGCTAAAAAAAGGCCAGTCACTATCTGAATGACTAAACAAAGACCTGCTAACGGACCGAACCCCCACCAATAAC
TAAGATTGCTCGGGGTTGGATAATCTATCAAATGCTGATTCAGTGTGGAGGATATAGGTTGTTTAAGAAGAGAGAATCGTTGCTTTCTTTTAGTCATTTC
TCTTGACTATCGTGAGAACTCTTGTTCCCCCACCTTTTTAGCGCCTTCTGGGGGCCTTGCCCTGCTTTAGAAAGGAGAGAATTGAAGAAATCTCTCCAAC
CTTTTCTATCGAGACTTAGAAGTAGGGCGAGACAAAGTCAATATGATATTTGCGTTGGTTTTTCCAACTCAAGGAAAGACTTTTTTCTCTTTATCATTCT
ACAGGCTCAGTCCCCACACTCTGACTGAAGGGAAGAACCTCCGCACTCCAATGAACAAGAGTTCTCCGCCTTACTTTACTATATTGAGA