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Detailed information on CNT30381257


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-97

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628664Manihot esculentaVigna unguiculata67.238.7785.9461forward
CNT30505570Manihot esculentaNicotiana attenuata63.412385.75435forward
CNT3025196Manihot esculentaPopulus trichocarpa67.265.385.68461forward
CNT30176450Manihot esculentaVigna angularis67.241.9185.03461forward

Expression of CNT30381257

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVRVLTNICMPPRRRSTRWRVDSFWIL*

Sequence

>CNT30381257
GAATATTATATTGGCAAGTCAAGCCAACTTTATTAACCCTTGAAGTAAAAGTACCAATGACCTTATAGCGGCCATTTCAAAAGCTTTAGTAAAGTACTCG
CAACCATTCCAAAATAACAAGTCTTGGAGGTTTAAAAACTTATTTAAAGCCATTAAGGCAAGGCATTACTAGTAGCTATTAAGAACATACTAGACACAAC
CAAAACTCAGAAACCACCGCGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCCTCAAGCTGCTTA
CCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCTTCTTTGTCCTGAATTTTGGCCTTGACATTGTCAATGGTGTCCGAACTTTCAACCTCCAAGG
TGATTGTCTTCCCTGTAAGGGTCTTAACAAATATCTGCATGCCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCTTTCTGGATATTGTAGTCTGC
AAGTGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGTGGAATTCCCTCTTTGTCCTGGATTTTAGCTTTAACATTGTCA
ATGGTGTCTGAGCTTTCCACCTCCAGGGTGATTGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCATCTGTTAGCCAGAAAGAAA