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Detailed information on CNT30381249


BLAST search results

BLAST vs Swiss-Prot:
sp|P33081|AX15A_SOYBN, E-value = 1e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315163Manihot esculentaCorylus avellana27.0314.8886.6790forward
CNT3019742Manihot esculentaCitrullus lanatus36.046.2584.17120forward
CNT30727280Manihot esculentaCorchorus capsularis32.7310.9282.57109forward
CNT30526628Manihot esculentaPhaseolus vulgaris46.5553.0883.87155forward
CNT30198235Manihot esculentaPisum sativum27.6310.685.8792forward
CNT30487885Manihot esculentaOlea europaea30.937.3484.47103forward
CNT3044405Manihot esculentaPrunus dulcis36.3416.7490.91121forward
CNT30159319Manihot esculentaPistacia vera16.5221.6594.5555forward
CNT3090059Manihot esculentaSolanum tuberosum35.7415.6882.35119forward
CNT30560987Manihot esculentaActinidia chinensis43.2428.3585.42144forward
CNT3087148Manihot esculentaVigna radiata45.6525.6887.5152forward
CNT30172882Manihot esculentaTrifolium pratense27.6319.7890.2292forward
CNT30144937Manihot esculentaMedicago truncatula31.5325.384.76105forward
CNT30655496Manihot esculentaRosa chinensis33.0338.1988.18110forward
CNT30716451Manihot esculentaMalus domestica golden20.7216.5986.9669reverse complement
CNT30620093Manihot esculentaCajanus cajan48.6516.8486.42162forward
CNT30645602Manihot esculentaCannabis sativa29.4315.3483.6798forward
CNT30174684Manihot esculentaVigna angularis45.6520.1686.18152forward
CNT30113367Manihot esculentaFicus carica22.8211.1985.5376forward

Expression of CNT30381249

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MKVCSSMILESQIVSFQHRLQGSPLAHPWKLIGLQKKTSEEFA*

>peptide 2 (41 aa)
TYYSALYKIVCTEFKSHEQFKQEMTSMNMFSQQGIVRPPIG*

Sequence

>CNT30381249
GCACTTACTACTCTGCTCTCTACAAAATTGTGTGTACAGAGTTCAAGTCTCATGAACAATTTAAGCAAGAAATGACATCAATGAACATGTTTTCACAGCA
GGGAATTGTAAGACCACCCATTGGATGATCATATCCAAATTCTTCTTCAGCTTGGATTAATAAATCTTGAAATGAAGGTTTGTTCAAGTATGATACTGGA
ATCACAAATCGTTTCCTTCCAACATAGACTGCAAGGTAGCCCTTTGGCACATCCATGGAAGCTGATTGGTTTGCAGAAGAAGACCTCTGAAGAATTTGCT
TAGCACGAAGAATGGCCAGCAAACGGAAACCCA