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Detailed information on CNT30381197


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST001145, E-value = 8e-169

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234855Manihot esculentaBrassica oleracea19.1537.7985.84113forward
CNT30216367Manihot esculentaKalanchoe fedtschenkoi18.4730.1183.49109forward

Expression of CNT30381197

Peptides detected in this lncRNA

>peptide 1 (39 aa)
VHHIKYTLTNLISKWLIKWWLKVHVITKNKNSLQGYKAF*

>peptide 2 (37 aa)
MYNESERVRFLIPFGETSTLLVISSCAGGETIKTLAP*

Sequence

>CNT30381197
GGTGCATCATATCAAGTACACACTAACTAATCTCATCAGCAAATGGCTTATTAAGTGGTGGCTAAAAGTACATGTTATAACAAAGAACAAAAATAGTCTG
CAAGGCTATAAAGCATTTTAACACACAGTGAGAAATTAATCTTGCATTTGATTTCTCCTTCAACCTTCATTCTGTAGCTTAGTACACGTAGCCCTTGACG
AACATTCCTTTCTTGGCTTCCTCTGATTCTCCTTCGCCGGTGTACTTGCCAAGCTGAGCAAGTGAGTTGGCCTTGGCACGGATAAGAAGTGCCTCCTGAG
CAGCCTGGACATTCTCAGGCAGCTTCCTTCACAGCCAGAGCAGATGGGCCATTGGGGATGCTCACAACAGTACGCCTAATCCATTGTGTTATGAACAATT
CTATCAGAAACTAATTCAAATATTTGATTCAGTATATGTATAATGAAAGTGAGAGAGTCAGATTTCTCATACCATTTGGCGAAACGAGCACCTTGCTGGT
AATAAGCAGCTGTGCGGGAGGCGAGACCATCAAGACCTTGGCACCATGACTCATTGTTGGAACCAGGAAGAGGCACCAAACCCTGTAAAG