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Detailed information on CNT30381141


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 1e-39

BLAST vs NONCODE:
NONMEST000732, E-value = 3e-88

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512572Manihot esculentaJuglans regia64.6342.4181.95338forward
CNT30703592Manihot esculentaQuercus lobata19.8923.5883.65104forward
CNT30376647Manihot esculentaArabidopsis thaliana36.944.1679.79193forward
CNT3061849Manihot esculentaArabidopsis lyrata35.5645.3780.11186forward
CNT30599104Manihot esculentaFraxinus excelsior18.7431.1183.6798forward
CNT30653577Manihot esculentaRosa chinensis39.7739.4782.69208forward
CNT3037313Manihot esculentaCucumis melo51.436180.67269forward

Expression of CNT30381141

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MRIKNWTIMIGRVKSKSKRAAFSISSAREGGAKVKEVAAMRERDLRFGSGGGGGGGGDEGFGGGHDRGGHGW*

>peptide 2 (30 aa)
MRGLEEAMIAVAMAGELENGDLVRMILKTE*

>peptide 3 (40 aa)
KFLFQFSLRLLLHLVKRCRYLRPCSPHNRRSLLFQLLNLR*

>peptide 4 (66 aa)
SFSSNSACVSFFILLSAADISALAARITAAACSSSCLTSAEVSLTLPSFSLIAASLSSMNLPRGEK*

Sequence

>CNT30381141
CAAGTTTCTCTTCCAATTCAGCCTGCGTCTCCTTCTTCATCTTGTTAAGCGCTGCCGATATCTCCGCCCTTGCAGCCCGCATAACCGCCGCAGCTTGCTC
TTCCAGCTGCTTAACCTCCGCTGAAGTGTCCTTGACGCTACCTAGCTTCTCCTTGATCGCGGCGTCTCTCTCATCCATGAATTTACCAAGAGGAGAGAAG
TAGAGTTTGTCGAGGGTGACCATGAGGATCAAGAACTGGACCATCATGATTGGGAGGGTTAAGTCGAAGTCGAAGAGAGCAGCTTTCTCAATTTCTTCGG
CAAGAGAAGGTGGAGCAAAGGTGAAGGAGGTAGCTGCAATGAGGGAGAGGGATTTGAGGTTTGGGTCTGGTGGTGGTGGTGGAGGTGGTGGAGATGAGGG
GTTTGGAGGAGGCCATGATCGCGGTGGCCATGGCTGGTGAATTGGAAAATGGAGATTTGGTGAGGATGATACTGAAAACTGAGTGAATTATGAAGGAGAG
ACTGTGTGTGGAAGTGGGCGAAG