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Detailed information on CNT30381030


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729401Manihot esculentaCorchorus capsularis42.0419.388.7177forward
CNT30711245Manihot esculentaGlycine max39.6746.2685.03167forward
CNT30566740Manihot esculentaActinidia chinensis45.1314.8481.58190forward
CNT30651855Manihot esculentaRosa chinensis33.2538.8990140forward
CNT30557237Manihot esculentaPanicum hallii27.329.2281.74115forward
CNT30726833Manihot esculentaLupinus angustifolius31.8360.3685.07134forward

Expression of CNT30381030

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MHPSCCNLTGSTDSQLQLPCEEQARSFHGQSSEANTPEYVGSTTHAHTQ*

Sequence

>CNT30381030
CGCTTTCCACAATCAGATATGAGCACATTGTAAGGTATGTTGTTATCTTGAAGACAAATGCAAGCATCCGAGACGGTGTTTGATAAATCTTGCAGAGTAT
TGCCTCCCTCAAATAGAAGGCCTCTGACAGGGTAATTCACTAGCTCATAGATTTTCACTCCACTGTCCAAAGTGGTTATCTTCTTAGTGGTTGATGGTAG
CAAATGCACCCAAGCTGTTGTAACCTAACCGGAAGTACGGATTCCCAGCTTCAGCTGCCATGTGAAGAGCAAGCAAGAAGCTTTCACGGTCAATCCTCTG
AGGCAAACACTCCAGAATACGTGGGATCAACAACACATGCCCATACTCAATAGGGCTAACCTGTAATATCAATGAAACAAAAGGCTTAAACCAATTTACT
ATAATTATTGGTGTCCTACTC