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Detailed information on CNT30380980


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 2e-46

BLAST vs NONCODE:
NONMEST000732, E-value = 2e-90

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617718Manihot esculentaSesamum indicum36.5723.3979.69320forward
CNT30635730Manihot esculentaCapsicum annuum30.7438.8281.04269forward
CNT30120137Manihot esculentaCitrus clementina31.7731.5280.58278forward
CNT30725668Manihot esculentaLupinus angustifolius33.2635.6279.73291forward

Expression of CNT30380980

Peptides detected in this lncRNA

>peptide 1 (85 aa)
FEIISFTTPIMKIIHENXXXXXXXXXXXXXKKKKKLLGSLHYPSMYSKAYKHKYYNFKASENSKNINLLCRKNLLHNLITESSNL*

>peptide 2 (79 aa)
MRIKNWTIMIGRVKSKSKRAAFSISSAREGGAKVKEVAAMRERDLRGDLGDMEFGSGGGGGGGGDEGFGGGHDRGGHGW*

>peptide 3 (30 aa)
MRGLEEAMIAVAMAGELENGDLVRMILKTE*

>peptide 4 (29 aa)
MLLAILPLFSSFQLQVSLPIQPASPSSSC*

Sequence

>CNT30380980
CTTCGAAATCATATCATTCACAACCCCAATTATGAAAATCATCCATGAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAG
AAGAAACTTTTAGGATCATTACATTACCCATCAATGTATTCTAAGGCATATAAACACAAATATTATAATTTCAAAGCTTCAGAAAATAGCAAAAATATAA
ATTTATTGTGCAGGAAGAACCTTCTTCACAATCTCATCACTGAGAGCAGCAATCTGTGAATCAAGTGATTTGATAGTTTCCTCTTTCTGCTTCTCCAAAT
TTCCCAATGCTTCTTGCAATTCTGCCTCTATTTTCTTCTTTTCAGCTGCAAGTTTCTCTTCCAATTCAGCCTGCGTCTCCTTCTTCATCTTGTTAAGCGC
TGCCGATATCTCCGCCCTTGCAGCCCGCATAACCGCCGCAGCTTGCTCTTCCAGCTGCTTAACCTCCGCTGAAGTGTCCTTGACGCTACCTAGCTTCTCC
TTGATCGCGGCGTCTCTCTCATCCATGAATTTACCAAGAGGAGAGAAGTAGAGTTTGTCGAGGGTGACCATGAGGATCAAGAACTGGACCATCATGATTG
GGAGGGTTAAGTCGAAGTCGAAGAGAGCAGCTTTCTCAATTTCTTCGGCAAGAGAAGGTGGAGCAAAGGTGAAGGAGGTAGCTGCAATGAGGGAGAGGGA
TTTGAGGGGAGATTTGGGGGATATGGAGTTTGGGTCTGGTGGTGGTGGTGGAGGTGGTGGAGATGAGGGGTTTGGAGGAGGCCATGATCGCGGTGGCCAT
GGCTGGTGAATTGGAAAATGGAGATTTGGTGAGGATGATACTGAAAACTGAGTGAATTATGAAGGAGAGACTGTG