Detailed information on CNT303809


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30464818Zea maysSaccharum spontaneum49.697.5494.44162forward
CNT3067359Zea maysLeersia perrieri35.8927.5982.05117forward
CNT30352097Zea maysEragrostis tef30.6723.9884100forward
CNT30366251Zea maysSorghum bicolor22.718.6495.9574forward
CNT30101514Zea maysOryza rufipogon41.124.5982.09134forward
CNT30576226Zea maysOryza barthii41.125.3882.09134forward
CNT30116488Zea maysOryza nivara41.123.6782.09134forward
CNT30604034Zea maysOryza punctata39.5727.4583.72129forward

Expression of CNT303809

Peptides detected in this lncRNA

>peptide 1 (30 aa)
VILCIGTIGSSRLVGCGGQRWWWWRHCAVG*

>peptide 2 (51 aa)
MVEGSMRNNYKVVEGISMVHLVHQMMHILMLQQGEWMSQNLVVLHQVDSSEL

Sequence

>CNT303809
TTGTCATACTCTGCATCGGCACCATAGGAAGCAGTAGACTGGTCGGTTGTGGAGGACAAAGGTGGTGGTGGTGGCGGCACTGCGCTGTGGGTTAACCAAG
GTGCAGTTGCAATACTCTGAGAGGGATCAACACTAGCCGGTGGTGGTGGTGGTGGAGGTGGTGGCTGAAATGGTGGAGGGTAGTATGAGGAATAACTATA
AGGTGGTGGAGGGTATATCGATGGTGCATTTGGTGCACCAGATGATGCATATACTGATGTTGCAACAGGGTGAGTGGATGAGCCAGAACTTGGTGGTGTT
ACACCAGGTGGATAGTTCTGAGCTCC