Detailed information on CNT30380881


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640312Manihot esculentaNymphaea colorata21.928.3687.7257reverse complement
CNT30514166Manihot esculentaJuglans regia2015.1290.3852forward
CNT30624035Manihot esculentaDaucus carota3016.788.4678forward
CNT30725038Manihot esculentaLupinus angustifolius2010.7288.4652forward

Expression of CNT30380881

Peptides detected in this lncRNA

>peptide 1 (59 aa)
LFFSFHFFPFHLCFSIFFRVLLNTKIKYYCSDGSMSMFSLVSHLQLHGSQLQFDPHLQP*

>peptide 2 (53 aa)
MDPCPCSVWFLTCSYTDHSCSLIHTCSHSHSHSFLRSKTFSSGFRGDFTKEIKF

Sequence

>CNT30380881
CTCTCTTTTTCTCTTTTCATTTTTTCCCTTTTCATCTTTGTTTTTCTATTTTTTTTAGGGTTTTATTGAACACCAAGATTAAGTACTATTGCTCTGATGG
ATCCATGTCCATGTTCAGTCTGGTTTCTCACTTGCAGTTACACGGATCACAGTTGCAGTTTGATCCACACTTGCAGCCATAGCCACAGCCACAGTTTCCT
CCGCAGCAAGACATTTTCTTCAGGATTTAGAGGAGATTTTACAAAGGAAATAAAATTTTA