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Detailed information on CNT30380328


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 3e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184957Manihot esculentaSecale cereale35.6316.4684.9593forward
CNT30219859Manihot esculentaHordeum vulgare35.6337.3584.9593forward
CNT30255419Manihot esculentaAvena sativa26.4412.9588.4169forward
CNT30418220Manihot esculentaPapaver somniferum26.8216.2885.7170forward
CNT3058538Manihot esculentaAmborella trichopoda26.056.388.2468forward

Expression of CNT30380328

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MNGTQIGILKKSDEALEGEFSDEELCALLILSDLAKSNGSGSEPVRFL

Sequence

>CNT30380328
GTAACCACTAAATAGAGATCATAAACACGATCACAAATTTACTACTCTTAAGCACGCTCGCCTCTGATCCTTCTCGCTAGCTGAATATCCTTTGGCATAA
TAGTTACTCTCTTGGCATGAATGGCACACAGATTGGTATCCTCAAAAAGTCCGACGAGGCGTTGGAAGGGGAGTTTTCTGATGAGGAGCTCTGTGCTCTT
TTGATACTTTCGGATCTCGCGAAGAGCAACGGTTCCGGGTCGGAACCTGTGCGGTTTCTTG