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Detailed information on CNT30380146


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 2e-100

BLAST vs NONCODE:
NONMEST000543, E-value = 1e-98

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525887Manihot esculentaPhaseolus vulgaris6.0120.5985.7177forward
CNT30505774Manihot esculentaNicotiana attenuata20.6955.4481.51265forward
CNT30171560Manihot esculentaTrifolium pratense23.3437.180.27299forward
CNT30145740Manihot esculentaMedicago truncatula29.4346.8383.02377forward
CNT30619829Manihot esculentaCajanus cajan32.7942.683.1420forward

Expression of CNT30380146

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MDKMVEFGPIRMSDFDTLACPLPTPHFLLLILPSPTYVFSGVNKFRQKKF*

Sequence

>CNT30380146
AATCTTAGTTAGCCTTGTTATAATAATAATAAAACTAAATGAATAGTATAAGAATGGGCCAATGGACCCAATAAGAGAACCTAGCCTATATCCGACACGA
TCCATACAGAAGATGAGATAACAGCCCATGGACGCCTAAAGCTGTTCAGGAAAGGAAGCGGCCATGGATCAATTTACGAACCCAGAAATTTAGCACTTTC
CAACCCTGCAGCGACTGGTTGTTGTTTTGTGTTGCAGCAACCTGGCAATTATCGTTCCCTAAGTGAACTTCACCTCAATTGGACTCGCATTCTTTCCGAT
TGACCTGAAATTCTGGCCAACACCTTGACGCCCTGGGTTCACCTTCTCAGGATACACCCCATCCTTCGGGTGCAAATATTGGACTTCCCCATTTGGAAAC
ACCCTGTAAAACTGGTACTTAATCTTGTATTTGGACCTCAGCCTTGTCCCAAGAGCCAAGCACTGCTCTTTCCTTGCCAGCTTAAGCAAGTTAGGACCTT
GCCTCATAATGGCTGCACCACCAGTGAGCATTTCAAATATTTGTTCCTTCGGTGAATCCCAAGTGATCACGTAAAACTCCTCCACCTGGGCCTTCTTTAA
CAACCCACCAGTGCTGCCGCCAAATATTGGTGATGGGGTATTTGGGTCCAACTCTGGTGGTGTGAATCCCACAGGAGCCTCCTCAGTTTTTCCCTCTGCA
GCAGTAGCCTTGATGGTTGTTTGAGGGTTGGAGTATTTTTTAGCAGAGGTAGGGATTGAGATAAAGGAGGATTGTTTCCATGGCACCATCACATGGTTGC
TTGATTTAAGGGTGGAGATGATGGTGGGTGTGAAGAGAGAAGCTTGAGTTGCCATTGCTACAAGGAATCCGAGATTCTGGGGAGGCTAAGCAATGATTTC
TACGACGTGGAGCTGTTTGTGACGAAGAAGATAGAAAAAGGGTGGTTGATTTAGGTGGGTGGTGGCGTAACTATGGATAAGATGGTAGAGTTTGGACCAA
TTAGAATGTCTGATTTTGATACGTTGGCTTGCCCCTTACCCACACCTCATTTCCTTCTTTTAATCCTCCCAAGCCCAACCTATGTGTTTTCTGGTGTAAA
TAAATTCAGACAAAAAAAATTTTAAAATAAACTATTAATTTGAAGTATCAAACTTTTAACATAAACATCAATATAACTAGACATGAATTCATTTTATTAG
TGAATTTCTCAAAATCACTTCAAAAAGTAAATAATCCAAAGTTAATTTAAATATCATTTAACATAATTTCTAAAAAGAAAA