Detailed information on CNT30380145


BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 1e-177

BLAST vs NONCODE:
NONMEST004097, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274113Manihot esculentaChenopodium quinoa23.4270.6784.13441forward
CNT30368770Manihot esculentaSorghum bicolor37.8799.5885.69713forward
CNT30113122Manihot esculentaFicus carica26.1359.2884.76492forward

Expression of CNT30380145

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVIPRSRSALSLSRTQAYLNDLLFISAASFSNLSITRLSIPPSL*

>peptide 2 (42 aa)
MPRSINDSAVVLGGLKLPQGNINGDTTFTLSLELVKNPGILE*

>peptide 3 (53 aa)
MGLVGIIFTNPASPFFKNLGSFSSSLPDLRSILVKISANFTAMWEVWQSSTGA*

>peptide 4 (51 aa)
MMMTCDVKLAASLAGSSLEFDATNPLFRSFTATFFTLNPTLSPGRASWRAS*

>peptide 5 (82 aa)
MSLTANLPMEGTQRKSPQPWAWSESSSRTQHHHFSKTWAPSQALCQTYDQSWLRFQQTSQQCGRCGNPALGHNHFQSDQGGS*

>peptide 6 (54 aa)
MMHLNRLNFSCQTSRSEGHNHSRLQDTSFHTTHWDSSNTTNLVNILKWETERLV*

>peptide 7 (29 aa)
MVLSTASHCHSSTKHGWDSNYQSQTWLNN*

Sequence

>CNT30380145
TGCAAAAAATAGCCGCCTCCTTGAAATCAGAAAGAAAATCTCTCATACATAACAAAAAGTAACTAGAAAATATAGTTTCAGCATAATCACCAAAACATGG
TGTTATCTACTGCAAGCCACTGCCACTCTTCCACCAAACATGGGTGGGACAGCAACTACCAATCTCAGACATGGCTAAATAACTGAACAGAAACAAAACT
ACACGATAAATAAAAAACTCCACGCAGTATCAAAAGAAACTACGAACCCTGCGTTCACTTTCCTCCCTTCTTGGCGGCAGACTTGGTCACTTTAGCTCCA
CTTGGGTCCTTCTTCTCAACACTCTTGATCACACCAACAGCAACAGTCTGGCGCATGTCCCTAACAGCGAATCTACCCATGGAGGGTACCCAGAGAAAGT
CTCCACAACCATGGGCTTGGTCGGAATCATCTTCACGAACCCAGCATCACCATTTTTCAAAAACTTGGGCTCCTTCTCAAGCTCTTTGCCAGACCTACGA
TCAATCTTGGTTAAGATTTCAGCAAACTTCACAGCAATGTGGGAGGTGTGGCAATCCAGCACTGGGGCATAACCATTTCCAATCTGACCAGGGTGGTTCA
TGATGATGACCTGCGATGTAAAGTTGGCAGCCTCCTTGGCAGGATCATCCTTAGAGTTTGATGCAACAAATCCTCTCTTCAGATCTTTCACTGCAACGTT
CTTCACGTTGAACCCAACATTGTCACCAGGGAGGGCCTCCTGGAGAGCCTCATGATGCATCTCAACAGACTTAACTTCAGTTGTCAGACCAGTAGGTCCG
AAGGTCACAACCATTCCAGGCTTCAGGACACCAGTTTCCACACGACCCACTGGGACAGTTCCAATACCACCAATCTTGTAAACATCCTGAAGTGGGAGAC
GGAGAGGCTTGTCTGAGGGCCTCTTGGGCTCCTGGATCTGGTCCAGAGCTTCAAGAAGAGTTGGGCCCTTGTACCAGTCAAGGTTGGTTGATCTCTCAAT
CATATTGTCACCTTCAAACCCAGAGATGGGAACAAAAGGAATCTTATCAGGGTTGTATCCAACCTTCTTGAGGTAGGAGGAGACTTCCTTGACAATTTCA
TCGTACCTAGCCTTGGAGTACTTGGGGGTGGTGGCATCCATCTACAGAGACATTAAAAAACAATAAGTGCGACAAAAAATTGATCTCAAAGCACATATAC
ATATAGAACTTAACAATACTAATACTTATATTTCCCAAATAACAGCAACCTCATATCAATATAACCTCTCTCCTGGACAGATAAGATCCAAGCATATCAT
TTACAATCAGCCATCGTGATCCTAAACAACTAGAATTTTACAGCCAACAATCACTCAACCTCTCAGCATTGCATTCTTAACACATTGCTCCTATCTTTTC
ATTTTTCAACAAAATTATGAATAGGAGGATAACATTCAGCACCAACACGAATGCACAGCCAAAGCCAGCAAGTAATTAGGTTGTTACCTTGTTGCAGCAG
CAAATCATTTGTTTGACACCAAGGGTAAAAGCAAGAAGGGCGTGCTCACGGGTTTGACCATCCTTGGAAATACCAGCTTCAAAACCACCAGTGGTGGAAT
CAATAATAAGGACAGCACAGTCAGCCTGTGAGGTACCAGTAATCATATTCTTAATAAAGTCACGATGCCCAGGAGCATCAATGACAGTGCAGTAGTACTT
GGTGGTCTCAAACTTCCACAAGGCAATATCAATGGTGATACCACGTTCACGCTCAGCCTTGAGCTTGTCAAGAACCCAGGCATACTTGAATGACCTCTTG
TTCATCTCAGCAGCTTCCTTCTCAAACCTCTCAATCACACGCTTGTCAATACCTCCAAGCTTGTAGATGAGATGGCCAGTGGT