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Detailed information on CNT30380105


BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 5e-85

BLAST vs NONCODE:
NONMEST004097, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721805Manihot esculentaTriticum spelta38.561689.18231forward

Expression of CNT30380105

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MMMTCDVKLAASLAGSSLEFDATNPLFRSFTATFFTLNPTLSPGRASWRAS*

>peptide 2 (39 aa)
GGVAIQHWGITISNLTRVVHDDDLRCKVGSLLGRIILRV*

>peptide 3 (54 aa)
MMHLNRLNFSCQTSRSEGHNHSRLQDTSFHTTHWDSSNTTNLVNILKWETERLV*

Sequence

>CNT30380105
GGAGGTGTGGCAATCCAGCACTGGGGCATAACCATTTCCAATCTGACCAGGGTGGTTCATGATGATGACCTGCGATGTAAAGTTGGCAGCCTCCTTGGCA
GGATCATCCTTAGAGTTTGATGCAACAAATCCTCTCTTCAGATCTTTCACTGCAACGTTCTTCACGTTGAACCCAACATTGTCACCAGGGAGGGCCTCCT
GGAGAGCCTCATGATGCATCTCAACAGACTTAACTTCAGTTGTCAGACCAGTAGGTCCGAAGGTCACAACCATTCCAGGCTTCAGGACACCAGTTTCCAC
ACGACCCACTGGGACAGTTCCAATACCACCAATCTTGTAAACATCCTGAAGTGGGAGACGGAGAGGCTTGTCTGAGGGGCCTCTTGGGCTCCTGGATCTG
GTCCAGAGCTTCAAGAAGAGTTGGGCCCTTGTACCAGTCAAGGTTGGTTGATCTCTCAATCATATTGTCACCTTCAAACCCAGAGATGGGAACAAAAGGA
ATCTTATCAGGGTTGTATCCAACCTTCTTGAGGTAGGAGGAGACTTCCTTGACAATTTCATCGTACCTAGCCTTGGAGTACTTGGGGGTGGTGGCATCC