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Detailed information on CNT30379990


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 1e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317114Manihot esculentaCorylus avellana36.3918.483.67147forward
CNT30514553Manihot esculentaJuglans regia64.1116.9684.56259forward
CNT30616412Manihot esculentaSesamum indicum56.196.8181.06227forward
CNT30727197Manihot esculentaCorchorus capsularis67.5715.3580.22273forward
CNT30402810Manihot esculentaBeta vulgaris21.0423.9485.8885forward
CNT30491885Manihot esculentaOlea europaea26.737.4487.96108forward
CNT30560302Manihot esculentaActinidia chinensis73.2723.6681.42296forward

Expression of CNT30379990

Peptides detected in this lncRNA

>peptide 1 (45 aa)
FFLQPFLTLASHSYKHQTCEIPLQNFYRILQEQYIQQSLLYPSLI*

>peptide 2 (56 aa)
MSKCNILVLQPPCKYSNPRATPIAMSCSVSNPNLQLAVEGFSSYIYFSRDPLDMNS*

Sequence

>CNT30379990
TTTCTTCCTCCAACCATTTCTAACACTAGCATCCCATAGCTATAAACATCAGACTTGTGAGATACCCCTCCAAAATTTCTACAGAATACTTCAGGAGCAA
TATATCCAGCAGTCCCTCTTGTACCCATCATTGATATGATACTCTCTGTTTCAGGGCATATTTTAGCTAGGCCAAAATCTGAAATTTTAGGACAGAAGTT
TTCGTCTAAAAGAATGTTGTGAGGCTTTATGTCAAAATGTAATATCCTTGTATTACAACCTCCGTGCAAGTATTCTAATCCCCGAGCAACGCCAATTGCA
ATGTCGTGCAGTGTTTCCAATCCCAATTTGCAATTAGCTGTCGAGGGATTTTCTTCATATATATACTTCTCAAGAGATCCATTGGACATGAACTCATAAA
TTAG