Detailed information on CNT3037983


BLAST search results

BLAST vs Swiss-Prot:
sp|P45726|PALY_CAMSI, E-value = 4e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315733Cucumis meloCorylus avellana32.9132.8183.12231forward
CNT30568715Cucumis meloActinidia chinensis20.829.9283.56146forward
CNT30435636Cucumis meloAegilops tauschii26.3526.8180185forward
CNT30242796Cucumis meloAvena sativa31.6254.0181.08222forward
CNT30135526Cucumis meloLolium perenne31.0525.5378.9218forward
CNT30572080Cucumis meloVitis vinifera37.6141.9779.55264forward

Expression of CNT3037983

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MCWWDRRCRRRLPRARLLARDLSRKILIPEENHILPCRVFFGWFVEGHFSLPPSYFLRIVLNRLLGKALPCMLQT*

>peptide 2 (56 aa)
MVCRRAFFTTSLIFSSYCLKSIAWQSATMYVADMSFSISMASADFLAEIRPREFTS*

Sequence

>CNT3037983
GAGATCCATAAAACCTTACGGATATTAACATTATTAATAGGATATTGAAAATTAGTTAAAAAGCCTAATACTTGATCTTATTCTTCATACAATTTCCTCA
TCTAATCTCTAAAATTTGCCCTAATTCTTCAAACACTCCATCAAAACATTTCCAAGCTTCCCTTCATCAATGGCTTCCACCACTTTCTCAATATCTTCTC
CAGGGCTAATCTTCTTTGCTCCACTCAACAGTTGAGTCCCCAATTCATTTCTCACGAATCGGTAGATCGGGTGTAGGATGTGTTGGTGGGATCGTCGATG
TAGGAGAAGACTTCCTCGCGCTCGATTACTTGCAAGAGATCTTTCTCGCAAAATCTTGATTCCAGAAGAGAACCATATTCTGCCATGTAGAGTGTTTTTC
GGATGGTTTGTAGAAGGGCATTTTTCACTACCTCCCTCATATTTTCTTCGTATTGTCTTAAATCGATTGCTTGGCAAAGCGCTACCATGTATGTTGCAGA
CATGAGCTTTAGTATTTCAATGGCTTCAGCGGATTTTCTGGCTGAGATTAGACCTAGAGAGTTTACATCTTGATTGTGTTGTTCTGCACTTTGGACATGG
GTTGTGACAGGATTTGCTAAGTATTGGAGCTCAGAGCAATAAGCGGCCATGGCGATTTCCGCCCCTTTGAAGCCGTAGTCCAAGCTAGGATTTGGTCCGC
CG