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Detailed information on CNT30379393


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376145Manihot esculentaArabidopsis thaliana25.0824.7689.4776forward
CNT30618209Manihot esculentaSesamum indicum23.111.159070reverse complement
CNT30502458Manihot esculentaNicotiana attenuata23.4323.3687.3271forward
CNT30716661Manihot esculentaMalus domestica golden30.693089.2593forward

Expression of CNT30379393

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PSSVTWACNPSGGSKVLERCSSPYGRIRLG*

>peptide 2 (38 aa)
MAGSGLANFWLARSKLRVKPGDLGEGLGLLVPRAEGNA*

>peptide 3 (30 aa)
MREAGFTEQRLPLAPSSGRITGWCHPGPYG*

Sequence

>CNT30379393
GCCGAGCTCAGTAACGTGGGCTTGTAACCCAAGTGGGGGCTCTAAGGTGTTGGAACGTTGTTCGAGCCCTTATGGCAGGATCAGGCTTGGCTAATTTCTG
GCTTGCCCGTTCCAAGCTGAGAGTTAAACCAGGGGACCTGGGCGAAGGCTTGGGTCTCCTAGTTCCTAGAGCAGAGGGTAATGCGTGAGGCTGGCTTCAC
AGAGCAGCGATTACCTCTCGCTCCCAGCAGTGGAAGGATAACAGGTTGGTGCCATCCTGGTCCATATGGCTAGATGGGCTGTGCTAACTGGACCATCACT
TTT