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Detailed information on CNT30379366


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30146769Manihot esculentaMedicago truncatula37.2937.1784.07113forward
CNT3016941Manihot esculentaZea mays19.8209060reverse complement

Expression of CNT30379366

Peptides detected in this lncRNA

>peptide 1 (30 aa)
LSSVTWACNPSGGFKVLGRCSSPYGSIRLG*

>peptide 2 (38 aa)
MAVSGLANFWLARSKLRVKPWDLGEGLGLLVPRAGGNA*

Sequence

>CNT30379366
GCTGAGCTCAGTAACGTGGGCTTGTAACCCAAGTGGGGGCTTTAAGGTGTTGGGACGTTGTTCGAGCCCTTATGGCAGTATCAGGCTTGGCTAATTTCTG
GCTTGCCCGTTCCAAGCTGAGAGTTAAACCATGGGACCTGGGCGAAGGCTTGGGTCTCCTAGTTCCTAGAGCAGGGGGTAATGCGTGAGGCTGGCTTCAC
AGAGCAGCGATTACCTCTCGCTCCCAGCAGTTGAAGGATAACAGGTCAGTACCATCCTGGTTCATATGGCTAGATGGGCTGTGCTAACTGGACCATCACT
TTT