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Detailed information on CNT30379331


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499584Manihot esculentaCoffea canephora21.1221.0589.0664reverse complement
CNT3096133Manihot esculentaSolanum tuberosum23.4323.4387.3271forward

Expression of CNT30379331

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MAGSGLANFGLARSKLRVKPWDLGEGLGLLVTRAEGNA*

>peptide 2 (30 aa)
MREAGFTEQRLPLAPSSGRITGQCHPGPYG*

>peptide 3 (30 aa)
LSSVTWACNPSGGSKVLGRCSSPYGRIRLG*

Sequence

>CNT30379331
GCTGAGCTCAGTAACGTGGGCTTGTAACCCAAGTGGGGGCTCTAAGGTGTTGGGACGTTGTTCGAGCCCTTATGGCAGGATCAGGCTTGGCTAATTTCGG
GCTTGCCCGTTCCAAGCTGAGAGTTAAACCATGGGACCTGGGCGAAGGCTTGGGTCTCCTAGTAACTAGAGCAGAGGGTAATGCGTGAGGCTGGCTTCAC
AGAGCAACGATTACCTCTCGCTCCCAGCAGTGGAAGGATAACAGGTCAGTGCCATCCTGGTCCATATGGCTAGATGGGTTGTGCTAACTCGACCATCACT
TTT