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Detailed information on CNT30379315


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 1e-174

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-98

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727318Manihot esculentaCorchorus capsularis51.0756.5383.57645forward
CNT30169882Manihot esculentaPistacia vera52.7332.2885.89666forward
CNT30355742Manihot esculentaLactuca sativa52.2642.283.48660forward
CNT30574249Manihot esculentaVitis vinifera42.6854.2384.97539forward
CNT3033712Manihot esculentaTheobroma cacao52.3458.4483.51661forward
CNT30120658Manihot esculentaCitrus clementina52.9766.585.2669forward
CNT30113899Manihot esculentaFicus carica55.4255.683.29700forward

Expression of CNT30379315

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSIVSELSTSRVIVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 2 (34 aa)
MVSELSTSRVMVFPVRVFTKICILETGKESRKVF*

Sequence

>CNT30379315
TAGAGGAAATCAAGTAACTTTATTTATCAATCAGACTTAAAACATGACACAATACTATTAGATATCCTTGGCAAAGAACATCTGATGTTTAATATGAAAT
GCAAGAAACCAAATACTAGACACACAACTTTGAAAAGAAACAGACTTTGATTCAGCAATCACCACCGCGAAGACGGAGCACAAGGTGGAGGGTGGACTCC
TTCTGGATATTATAATCAGCAAGTGTACGCCCATCCTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCAGGCGGTATCCCTTCCTTGTCCTGGA
TTTTTGCTTTGACATTATCAATAGTATCCGAGCTCTCGACTTCTAGAGTGATTGTCTTCCCGGTCAAGGTCTTCACAAAAATCTGCATACCCCCACGAAG
CCTAAGAACCAGGTGGAGTGTCGACTCCTTCTGGATGTTATAATCGGCAAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGA
TCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATTGTGTCGGAACTCTCCACCTCAAGAGTGATAGTCTTGCCGGTGAGGGTTT
TGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGTGTACGGCCGTCTTCAAGCTG
CTTTCCGGCGAAGATCAACCTCTGCTGATCGGGTGGTATTCCTTCCTTGTCTTGGATCTTGGCCTTAACGTTATCGATGGTATCAGAGCTCTCGACCTCG
AGTGTAATGGTCTTTCCGGTGAGGATCAACCTCTGCTGATCGGGTGGTATTCCTTCCTTGTCTTGGATCTTGGCCTTAACGTTATCGATGGTATCAGAGC
TCTCGACCTCGAGAGTAATGGTCTTTCCGGTGAGGGTTTTCACGAAGATCTGCATACTGGAAACTGGAAAGGAATCGAGAAAGGTGTTTTAGAAAAGTCG
GAGTGACCAAAGGATTTAGGATGATGAGATTCAGATGAGGAGAAGAGAAGAGGAAAAGCTTATTATATAGGGGCAGTTGCCGACTCAATTGATTGGAAAA
TCTCCATAGGAAAGAAACAAAAGCTGGAATCTAACGGTCAATATTGATCGATGAAGTCATGGGTTGCGTAGTTGGTAGGTTCGTGGTCATGATGAAGAAC
CTTCAATGTAATTACTCGACTGTTCTAGTAATCTAGTCGGCTTCCAATTTTAGGCCCTTTTTT