Detailed information on CNT30379170


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30143824Manihot esculentaMedicago truncatula45.2145.3682.48137forward

Expression of CNT30379170

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MREAGFTEQRLPLAPSSGKITGQYHPGSYG*

>peptide 2 (30 aa)
PSSVTWACHPSGGSKVLERCSSPYGRIRLG*

>peptide 3 (38 aa)
MAGSGLANFWLARSKLRVKPWDLGEGLGLLVPRAGGNA*

>peptide 4 (39 aa)
AELSNVGLSPKWGLEGVGTLFEPLWQDQAWLISGLPVPS*

Sequence

>CNT30379170
GCCGAGCTCAGTAACGTGGGCTTGTCACCCAAGTGGGGGCTCGAAGGTGTTGGAACGTTGTTCGAGCCCTTATGGCAGGATCAGGCTTGGCTAATTTCTG
GCTTGCCCGTTCCAAGCTGAGAGTTAAACCATGGGACCTGGGCGAAGGCTTGGGTCTCCTAGTTCCTAGAGCAGGGGGTAATGCGTGAGGCTGGCTTCAC
AGAGCAGCGATTACCTCTCGCTCCCAGCAGTGGAAAGATAACAGGTCAGTACCATCCTGGTTCATATGGCTAGATGGGCTGTGCTAACAGGACCATCACT
TTT