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Detailed information on CNT30379168


BLAST search results

BLAST vs Swiss-Prot:
sp|P27518|CB21_GOSHI, E-value = 8e-151

BLAST vs NONCODE:
NONSTUT002514, E-value = 2e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30560173Manihot esculentaActinidia chinensis25.3932.3786.3292forward
CNT30326027Manihot esculentaAsparagus officinalis29.6559.9384.16341forward
CNT3035928Manihot esculentaCucumis melo29.9172.5783.14344forward

Expression of CNT30379168

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MLGGALLTVLRMEKRPPSKEPTLRTSSFDCFRAVCPANAECWIAEVAMSKLLCEEEVS

>peptide 2 (67 aa)
MLNLILPSFSRNKVSSICPCIVGHWISQVIKEVLNSLNEESKHRKHCQASILDLFHLQFCKCIRIIS*

Sequence

>CNT30379168
CAAGTAGAGTAATGACGACGTCCACTACAAGAACATTTCCAGAAATTTAAAATACTGGTACTGAGATGTTGAACTTGATTCTCCCTTCATTTTCCAGGAA
CAAAGTTAGTAGCATATGCCCATGCATTGTTGGCCACTGGATCAGCCAAGTGATCAAAGAGGTTCTCAATAGCTTGAACGAAGAATCCAAACATAGAAAA
CATTGCCAAGCGTCCATTCTTGATCTCTTTCACCTTCAATTCTGCAAATGCATCAGGATCATCAGCTAGTCCCAGAGGATCAAATGCACCACCAGGGTAA
ATAGGGTCAAGTCCTTCCCCAAGTGGTCCTCCACCAACTCTATAGCCTTCAACAAATCCCATTAGCACGACCTGAACAGCCCAGATTGCAAGGATACTCT
GAGCATGGATAAGGTTAGGGTTGCCAAGATAATCAAGACCGCCTTCTGAAAAGATTTGGGCTCCAGCTTTGAACCAGACTGCCTCGCCAAATTTGACACC
ATTCTTGGATAGGATTTCGGGGAAGACGCAGCCAAGTGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCAAGCTCACGGTTCTTGGCAAATGTCTCT
GGATCTGCAGACAAACCAGCAGTGTCCCATCCATAATCACCGGGGAATTCACCAGTAAGGTATGAGGGAGTTTGCTCAGAGAATGGACCCAAATATTTTG
GGCGGTCTGGACCATACCTGTTTTATGAATTACAGTTAGATATATCCCCAACGCAAAATAGTAGCCGTTTATTCTCAAAGCAACTTGCATACACGTAACC
AAAGCTCTCTCAAGTTTTCTTTGCTTATTTTCTTGGACATCTCCTTAAAAGATAAGATGCCTTTGAGCTCTACAAATTCGTTTTCTCTTCTTCTTCTTCT
AATTATTTGGCTTAATCCCCATTTTTTAAGAAATTAAGATAATAACAATTTGTAATTGAGAATAATAAATACCATATGCTTGGTGGAGCACTCTTGACAG
TTCTGCGCATGGAAAAGCGACCGCCGTCGAAGGAGCCAACCTTGCGAACGAGCTCATTTGATTGCTTCAGAGCGGTCTGCCCAGCAAATGCAGAGTGTTG
GATTGCAGAGGTTGCCATGTCTAAATTACTTTGTGAAGAGGAGGTGTCTG