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Detailed information on CNT3037914

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30678576	Cucumis melo	Setaria viridis	6.11	25.69	90	130	reverse complement
CNT30549034	Cucumis melo	Ipomoea triloba	19.45	24.78	89.13	414	reverse complement
CNT30632593	Cucumis melo	Vigna unguiculata	19.55	24.64	90.38	416	forward
CNT30504974	Cucumis melo	Nicotiana attenuata	8.32	32.01	93.79	177	forward
CNT30288445	Cucumis melo	Triticum aestivum	19.45	81.66	89.37	414	forward
CNT30221494	Cucumis melo	Hordeum vulgare	18.75	32.13	88.97	399	forward
CNT30400759	Cucumis melo	Triticum turgidum	19.45	35.14	89.37	414	forward
CNT30585857	Cucumis melo	Musa acuminata	19.45	20.76	86.47	414	reverse complement
CNT30234810	Cucumis melo	Brassica oleracea	16.87	47.42	85.52	359	reverse complement
CNT30147389	Cucumis melo	Medicago truncatula	19.45	44.76	90.34	414	reverse complement
CNT30440683	Cucumis melo	Aegilops tauschii	18.28	40.27	89.72	389	forward
CNT30248040	Cucumis melo	Avena sativa	19.45	30.76	89.37	414	reverse complement
CNT30658989	Cucumis melo	Triticum dicoccoides	19.45	51.88	89.37	414	forward
CNT3081478	Cucumis melo	Brassica juncea	16.21	29.79	84.35	345	forward
CNT3016633	Cucumis melo	Zea mays	19.45	21.66	89.61	414	reverse complement
CNT30229838	Cucumis melo	Ananas comosus	19.41	93.23	89.59	413	reverse complement
CNT30218527	Cucumis melo	Kalanchoe fedtschenkoi	19.45	27.8	90.34	414	reverse complement
CNT3067373	Cucumis melo	Leersia perrieri	8.83	62.25	89.36	188	forward
CNT30651680	Cucumis melo	Rosa chinensis	8.32	38.23	90.96	177	forward
CNT30209369	Cucumis melo	Helianthus annuus	19.6	48.89	88.49	417	forward
CNT30683015	Cucumis melo	Triticum urartu	19.45	42.03	89.61	414	reverse complement
CNT30721611	Cucumis melo	Triticum spelta	8.32	38.39	93.79	177	reverse complement
CNT30369805	Cucumis melo	Oryza glumipatula	17.95	26.64	89.01	382	forward
CNT30154718	Cucumis melo	Prunus persica	7.33	22.51	92.95	156	forward
CNT30434588	Cucumis melo	Papaver somniferum	6.91	43.75	87.07	147	forward
CNT30104484	Cucumis melo	Oryza rufipogon	12.41	98.88	86.74	264	reverse complement
CNT30575744	Cucumis melo	Oryza barthii	19.45	29.01	88.41	414	forward
CNT30582488	Cucumis melo	Echinochloa crusgalli	19.45	34.1	89.61	414	forward

Expression of CNT3037914

Peptides detected in this lncRNA

>peptide 1 (57 aa)
IETGRWVTANSLRLIISRFSSIGQSQRKPILHRFTKKRGISPPLKVINIVRSLFQIN*

>peptide 2 (38 aa)
MLSKPIHLSEIEESGISCVGVKSGDIRRKAKSKGSSLGP

>peptide 3 (45 aa)
MKGLITLNWSKGLMYFQVKREITLFKLIETQPKTSTRTRARAYPY*

>peptide 4 (68 aa)
MSVNHEKKKLLISLSLLFLSVLTKIPYLGTRTRIERSAKRVGRVSSFLFVRSPKNKIIKSERLSFSRA*

>peptide 5 (60 aa)
MRKETFRIRVFLRLRQRSGSIRKSTFRISFSGSETRPELPRGAAVGNLGQCAKARSSNIT*

>peptide 6 (38 aa)
MPRKDFLGLEILLRNDAHYAVAAVEPVSILAVLDFDRE*

Sequence

>CNT3037914
GATTGAAACTGGACGGTGGGTGACCGCAAATTCTTTGCGCCTTATCATTAGTAGATTTTCATCCATCGGTCAAAGTCAAAGAAAACCCATTCTTCACAGG
TTCACCAAAAAGAGAGGCATTTCACCGCCGTTGAAAGTCATCAATATTGTGAGATCTCTCTTTCAAATAAATTAGGCTTGATTTGATATTGGTCATTCTC
GAGCTTACCACCGAGCGATCGAAGGACGGATTCAACCTCTCATGCCCTAGCCTGCTGTTCCGATTTCAATGGCACCTACTTAACGGATGAACTCAAGAAA
GAAAGATTTCTCTTCTACATCGCACCTCTGTTCTCGCTATGTGCCTATTTTAGTAGAATGAATTCCCTCCACCCGACAATGAGGCACTCCGCGGTAGGCC
TTCTTCAATTCAATGGGGACCCTAGTGTACGAGCCTAATGCTCTTTATTTGCTTCTGCCGATTCCCCGCTTGGATCAGACAAGGCGGTAGAAGTTTGACC
TTTGGATAGTCAAGGATCCCTCTTTCTGAAAGTATGTCAAGAGCATACTTGAGCTCAGAAAGACACACACCATGCGATCATTGATCTACTGAAATGCCAA
GGAAAGACTTCCTTGGTCTGGAAATCTTGTTAAGAAATGATGCCCACTACGCGGTTGCGGCTGTTGAGCCAGTTTCGATTCTAGCCGTTCTTGATTTCGA
TAGGGAATGAAAGGCCTAATAACCTTGAACTGGTCGAAAGGATTGATGTATTTCCAAGTCAAAAGAGAAATCACGCTATTCAAGCTGATCGAAACTCAGC
CAAAGACTTCAACGCGAACAAGAGCGAGGGCCTATCCATATTAACCTGTGACTTTCTTCTCTCCTTTCAGTCGAGCCTCTTCTGAATTGCTGGGCTTGTT
TTGACTCGTACAGGACACTCTCTCTCACCATAGACATTTCCTACCGAAAGAGAGCGCTTGCTGTCCCTGGCATTGGCATTCGCTATCTTCGGTGGGTGGT
CTTTTGTCTAAAGTATGATAATGGGGAATCTTTTCAGAGTGAACAATAGAAGTGCTTGAACAAAAAAAAGCAAGGAAACTCGACCACCAGGCGCGGATCG
ACCACGCGAGTTCTTTCCGCTGAAGCTCTTGAATGTCGGTAAATCATGAGAAAAAAAAGCTTCTCATTTCTTTATCTTTGCTTTTCTTGTCTGTCTTAAC
AAAGATTCCGTACCTGGGAACAAGGACTAGGATTGAAAGATCGGCGAAGCGGGTAGGACGCGTCAGCTCTTTTCTATTTGTCCGATCTCCAAAGAATAAG
ATAATCAAGTCCGAACGTCTTTCATTTAGTCGAGCCTGAAGTTTCTTCTTGTTCTTGGACTTGTTTATGGAATTGAACCGCCAAATTCATGGATAGGGCT
TGCCGTAGGAGTACTAAAAGGAGGAATTGCATTTTGATGCGTCCTAGGTAGCTTAATATACTTCCAGCCTTTGCCTTTTTTTCTTCTTAAGAGATATTAT
CTTGTCTTTCATTTTCCTTTCACCTCCCTAGGGTCCTTGAGTTCCAGTCCTTCCCGCATCAAGAATCAATCCCACAAGTTCAAGAGGAGAGGTCTCGTAT
TCCGGATAAAAGATCAACAAGAAAATGAGAAAGGAAACCTTCCGGATCAGAGTCTTCCTTCGTCTTCGTCAGAGGTCAGGATCAATCAGAAAGTCAACCT
TCCGGATCTCATTCTCTGGGTCTGAGACACGACCCGAACTCCCACGAGGGGCAGCAGTGGGGAATCTTGGACAATGTGCGAAAGCCCGATCCAGCAATAT
CACGTGAGTGAAGAAGGGCAATGCCGCTTGTAAAGCTCTTTCCTCGAGTGCGCGATCATGATAGGACTCGAGGAAGATGCCTCGGCTAACTCTGTGTCAA
TAGCCGCGTAAGACGGGGGGAGGGGGCAAGTATTCTTTAGAATGACTGGGCGTAAAGGACATGTAGGTGGTGAATCAAGTTGAAAGTTCAAGTCGCTAAA
AACTGGTGGAATGCTCTCGAAACCCATTCATTTGAGTGAGATAGAGGAGAGTGGAATTTCGTGTGTAGGAGTGAAATCTGGAGATATACGAAGGAAGGCC
AAAAGCAAAGGCAGCTCTCTAGGTCCCT