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Detailed information on CNT30379091


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 1e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549166Manihot esculentaIpomoea triloba58.3151.1982.27344forward
CNT30377104Manihot esculentaArabidopsis thaliana48.1440.2382.39284forward
CNT30500730Manihot esculentaCoffea canephora54.2437.0484.69320forward
CNT30616396Manihot esculentaSesamum indicum50.5158.4381.21298forward
CNT30489004Manihot esculentaOlea europaea40.5138.9384.94239forward
CNT30710559Manihot esculentaGlycine max95.9385.7679.15566forward
CNT3091701Manihot esculentaSolanum tuberosum59.6646.3282.95352forward
CNT30508793Manihot esculentaSolanum lycopersicum36.7856.2284.79217forward
CNT3076593Manihot esculentaBrassica juncea49.1553.1184.48290forward
CNT30263629Manihot esculentaBrassica rapa49.3250.7984.54291forward
CNT30648676Manihot esculentaRosa chinensis53.0542.0184.35313forward
CNT30476941Manihot esculentaArabidopsis halleri47.6335.0881.85281forward
CNT30354733Manihot esculentaLactuca sativa38.9826.1480230forward
CNT30154791Manihot esculentaPrunus persica63.2248.0182.84373forward
CNT30705859Manihot esculentaPrunus avium63.2249.9382.31373forward
CNT30642027Manihot esculentaCannabis sativa51.3647.4981.85303forward
CNT30330871Manihot esculentaDioscorea rotundata48.4739.5681.82286forward
CNT3049544Manihot esculentaCucumis sativus61.8645.5783.29365forward

Expression of CNT30379091

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLGYSLVRLDCNQGMSGYKQVKWDYILEM*

Sequence

>CNT30379091
GGGGCTGTAAGGACTCGACGGTGACAATCTTGGACTGCTAGGTGAGTATGCCAGTGACGGACTGTATTTAGCTGACTGAGGATTGTAACTGGGTGAGGTC
GGGCTATAGCTTGGCGATGTTGGGCTATAGCTTGGTGAGGTTGGACTGTAACCAGGGGATGTCGGGCTATAAGCAGGTGAAGTGGGACTATATACTGGAG
ATGTAGGGCTATAGCTTGGTGAAGTTGGGCTGTAACTGGGAGATGTGGGGCTATAGCTTGGAGAGGTTGGACTATAACTTGGAGATGTTGGGCTATAGCT
GGGAGAAGTTGGGCTGTAACTAGGGGAAGTTGGGGAATACGATGGACTTGTAGGAGAATAGGCAGGACTGGTAGGGCTATAGCCAGGAGAACTAGGGCTA
TAAGTTGGCGAAGTTGGGCTGTATCCAGGTGAGGTGGGGCTATAACCAGGTGAGGTAGGGCTGTATCCAGGAGACGTAGGACTGTAACCAGGGGATGATG
GACTGTAACCAGGGGATGATGGGCTATAGCCTGGAGATGAAGTAGGAGAGAAAGCCATTCCACCTACATATGGTGAGAACTGAGCATCTG