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Detailed information on CNT30379045


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 5e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548039Manihot esculentaIpomoea triloba26.9329.9381.4129forward
CNT30623993Manihot esculentaDaucus carota23.3846.2883.04112forward

Expression of CNT30379045

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MLMPKTLALMAVQRQRAASRSTRSAMRLQQGASGGILIRPNTFAHTLNFRASTGQVAALPIVKKRRLRVSNNAMEAAALEAISQRSY*

Sequence

>CNT30379045
GGAGTACAGCTTATCACTTAACAAAAAAACGAAAAAAGGATTGAAGATGATAAGGAAGAATTTATTGGTTTAGTGCTAGTGTTGATAACAATACCACGAT
AAAGGAACGACTCATGGACACTGGAATCCTTCTGGAACCTTCTTGCCGCAGTTGTTGAGCACCAAGCTCAAGTCGACGGGTAAGCTGATGTTAATGCCCA
AGACATTAGCTTTGATGGCAGTGCAAAGGCAAAGAGCAGCTTCAAGATCAACAAGATCAGCAATGAGGCTGCAGCAAGGTGCATCTGGTGGGATCTTAAT
TAGACCCAACACATTCGCACATACTTTGAACTTTAGGGCATCCACAGGGCAAGTGGCAGCGCTCCCCATAGTGAAGAAGAGGAGGTTGAGAGTGAGCAAC
AACGCAATGGAGGCTGCAGCTCTTGAAGCCATTTCTCAAAGAAGTTATTGAATGGTTCTTGAGAAATAAGCTTTGTATG