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Detailed information on CNT30378945


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702777Manihot esculentaQuercus lobata33.0111.3589.8669forward
CNT30373585Manihot esculentaArabidopsis thaliana23.4419.9289.849forward

Expression of CNT30378945

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MGHWECSQLYAIWQNENPVGSKQQSERQGHQDLGTKIHHWNQPEEPVPV

Sequence

>CNT30378945
CCTGAGAAATAGCAGCATAGCGATCTAGACCCCAGGCTGCTTCCTTCGCTGCAAGTGCAGATGGGCCATTGGGAATGCTCACAACTGTACGCCATTTGGC
AAAACGAGAACCCTGTTGGTAGTAAGCAGCAGAGCGAGAGGCAAGGCCATCAAGACCTTGGCACCAAGATTCATCATTGGAACCAGCCAGAGGAGCCAGT
CCCTGTAGT