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Detailed information on CNT30378677


BLAST search results

BLAST vs Swiss-Prot:
sp|P42792|CYB_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548225Arabidopsis thalianaIpomoea triloba28.3663.0295.37777forward
CNT30619453Arabidopsis thalianaSesamum indicum8.7234.2497.49239forward
CNT30709047Arabidopsis thalianaGlycine max23.7262.5682.62650forward
CNT30180581Arabidopsis thalianaSecale cereale25.8431.8196.33708forward
CNT30592530Arabidopsis thalianaMusa acuminata6.3920.8890.86175forward
CNT3088309Arabidopsis thalianaVigna radiata7.7726.5394.37213forward
CNT30669339Arabidopsis thalianaTriticum dicoccoides8.7610097.08240forward
CNT30309525Arabidopsis thalianaCamelina sativa14.7497.8299.75404forward
CNT3082246Arabidopsis thalianaBrassica juncea13.7645.37100377forward
CNT30605197Arabidopsis thalianaGossypium raimondii9.3830.8993.39257forward
CNT30627054Arabidopsis thalianaDaucus carota6.247.0998.24170forward
CNT30688824Arabidopsis thalianaTriticum urartu31.2859.3195.22857forward
CNT30481172Arabidopsis thalianaChara braunii8.0366.0783.64220forward
CNT3055616Arabidopsis thalianaAmborella trichopoda12.1947.2490.42334forward
CNT3038142Arabidopsis thalianaCucumis melo15.8462.9994.24434forward
CNT30148125Arabidopsis thalianaBrachypodium distachyon6.563.891.57178forward

Expression of CNT30378677

Peptides detected in this lncRNA

>peptide 1 (41 aa)
RHNMRRGGHRISRYIIVGMSQNIRSIKNPNRKKDSKSYPTN*

>peptide 2 (87 aa)
MLIHEKRYEKFERTQIQNEGDRGNTSVSDSCKGTISWQLGQLITMFVPHITRKIGIFTKGFIKLSSQFKFSREQSTFVISTILLLRHL

>peptide 3 (32 aa)
MMGRTSALRRSNEQEFSALVYLEEWSGVTFVT*

>peptide 4 (36 aa)
MKVNHNKKHTCPISMHITEQPAPFNISHNVFYAVES*

>peptide 5 (35 aa)
MPIKEPRDANPRKTIREIRKNSDTERGRPWKYIGF*

>peptide 6 (36 aa)
MDWMISPRVLERRESGQNFSDSVTEQSDNPSVTQDG*

>peptide 7 (33 aa)
MTREKISSTKRDSGVRSLSNWRFSLISWDPYHL*

Sequence

>CNT30378677
TCCGGCACAATATGAGGCGGGGTGGACATCGGATTAGCAGGTATATAATTGTCGGGATGTCCCAAAACATTAGGAGCATAAAAAATCCAAATAGAAAAAA
AGATAGCAAAAGCTACCCAACCAACTAGATCCTTGACATAAAAATAAGGGTAAAAAGCTATTTTATCCATCTCAGAATGTACACCCAATGGATTATTTGA
TCCATATTGATGCAATGCGGCCAGATGAAGAAGACTGGCGCCTACTAAAATAAAGGGGAGTAAATGATGAAGACTAAAAAAACGATTTAAGGTGGCATTG
TCCACGGAGAAACCACCCCAAAGCCAAGTCACTATGGTATCTCCTACTACAGGTATGGCGCTAGCTAAGCTTGTAATTACTGTAGCTCCCCAAAAGCTCA
TCTGACCCCAAGGTAGTACATATCCTATAAAAGCTGTCACAATCATTAATAGGAAGATTACAACTCCAAGACACCAAACAAATTCCCTAGGACTGCTATA
ACTCGCATGATATAGACCACGAAAAATATGAAGGTAAACCACAATAAGAAACATACTTGCCCCATTAGCATGCATATAACGGAGCAACCAGCCCCCTTCA
ACATCTCTCATAATGTGTTCTACGCTGTTGAAAGCTAAATCCACATGAGGTGTGTAATGCATAGCTAAAAAAACGCCAGTCACTATCTGAATGACTAAAC
AAATACCAGCTAACGGACCGAACCCCCACCAATAACTAAGATTGCTCGGGGTTGGATAATCTACTAAATGCTGATTAAGTGTGGAGGATATAGGTTGTTT
AAGAAGAGAGAATCGTTGGTTCCTTATAGTCATTTCTCTTTCCTATCGTGACAACTCTTGTTCACCCACCTTTTTTTTGCGTTCTAGGGCCCTAAAATAT
CCTCAAATATATATATAATATTGATATTTGAGCCTTTCTTTTACTTTTGAAGGATGGAGGGGGCGAATTAAGCGTCGACGTTTTTAGAATTCTTTCTCCT
ACACACTTTTGCCCTCTTTCACCGAAAAGGAAAGAAGAATCTTTCAAGCGGGCAGAGACCTAAATTTCTTAGATTCATTCCTAAGCTTGCTTTGTCGCAG
CAAGATGGATTGGATGATCAGTCCGAGAGTGCTGGAGAGAAGAGAAAGCGGTCAAAACTTCTCTGATTCGGTCACCGAGCAGTCGGACAACCCTTCAGTA
ACCCAGGATGGATGACCCGAGAGAAGATCTCGTCCACCAAGCGGGATAGCGGAGTGCGATCCTTAAGCAATTGGAGGTTCTCGCTCATCTCTTGGGATCC
ATATCATCTGTGAAAACTTTTCCTGTTACATTAGCATAGCTAAATTTGAATAGGATGACTCAGCGTCAGGAAAAGTAAGCCCCCCTTTGCCTTGATTGAA
TTTGGCTTCGCTGCGCTCTGAATCAATCAATAAGCTTATTGATTGGATTCATCCCATTTCATTTGGGCGAGAGGTCCGAAGGAACAAAGGAGCTCGACTG
TAAGGAGAGGAACGAGAGTGAAACGAGAGGGAGGCTGGGGCTTATCCATGGGACTTGCCTTGGCGGTTAGACTCTCTTTTAACACATCCTCGAATTAGTC
TCGTCGGTTGGTTGATTCTCGAAATCACCTCTTGAGAAAAAAAAAAAAAAGGTCCATCAGGTTTTGCCCTGCCATCTCCGGCGAAGCTCCATATCCGTGA
GACTGGATCACTGTAATTCACAGAAGTCCATTTGGACCTCTCCTTTTAGTCGAGTATGTAAACAACCTCTCCTTTCAGTCGAGTTCCCTCTTTTATAAGA
GTAATAAATTACGTTGGACCTCTCGCAACAAGTGCTCGAGTAATAAATACCTCTCCTTTTAGTCGAGTCATTTATACCTCTCGGGAGTAGGGGCTTTGTT
CTGGGGGGGCCGACTTGCGCTGCTTTAGAAGGGAGATAATTTCATAAAGTAACTCTCTCTATCTATCCTTAGAAGTAGGGCGATAGAAAGTCAATATGAG
ATTTGCGTTGGTTTTTCCAACGAAACAAAGCATTATCATTCGGAAGGCTCAGTCCCAACTCGGACTTCCATGATGGGAAGAACCTCCGCACTACGGCGCT
CCAATGAACAAGAGTTCTCCGCCTTAGTATATTTAGAAGAGTGGTCGGGAGTTACATTCGTAACTTAATGTTATGTTCATGCATTATATCTTTCTTTCCA
AGAGTACTACCTGTACGTAGTCTATGTATGGGGAGCATACTTGACAGGAAATAGACACAAGCGGTAGAGAGGTCCCCCACTTCGATTCCCGCCCCGTTCG
CATCTCCGATCCAAGATAAGGGTTTTAAATACGTTACTTTTCGGTCCGGAGCCGGCTGGTAATGGGCTTACTTACCTTGCTTGTGGACCAGCTGCGGAGC
TAACCTTTCTTTGTTCTATTGGTTTGGTGGTTGCTACCAAGACGATTTATTTATGCCCATCAAAGAACCTCGAGATGCTAATCCACGAAAAACGATACGA
GAAATTCGAAAGAACTCAGATACAGAACGAGGGCGACCGTGGAAATACATCGGTTTCTGACTCGTGCAAAGGAACTATTTCTTGGCAACTTGGACAACTT
ATAACAATGTTTGTCCCGCATATCACTAGGAAGATCGGGATCTTTACAAAAGGCTTTATAAAGCTTTCGTCTCAATTCAAATTTAGCCGCGAGCAATCTA
CGTTTGTGATCTCTACTATTTTGCTTCTACGACATCTTAC