Detailed information on CNT3037862


BLAST search results

BLAST vs Swiss-Prot:
sp|P46280|EFTU2_SOYBN, E-value = 2e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376649Cucumis meloArabidopsis thaliana38.499.4783.25209forward
CNT30198746Cucumis meloPisum sativum16.9430.3685.8792forward
CNT3045091Cucumis meloPrunus dulcis15.2920.887.9583forward
CNT30237230Cucumis meloBrassica oleracea31.8620.682.66173forward
CNT30312307Cucumis meloCamelina sativa19.8927.7683.33108forward
CNT3075841Cucumis meloBrassica juncea29.6519.5680.12161forward
CNT30262296Cucumis meloBrassica rapa31.8621.4680.35173forward
CNT30626736Cucumis meloDaucus carota62.837.7682.99341forward
CNT30573737Cucumis meloVitis vinifera16.9429.7786.9692forward

Expression of CNT3037862

Peptides detected in this lncRNA

>peptide 1 (78 aa)
LLRLWHWTISTRNNQNRSIHLSSTSNHILDIISMSRTINMSIMSTLSLVLDSSCINRNTTSSFFRGSVNFIVFLWGFA*

>peptide 2 (83 aa)
MVKAAVRVVLPWSTWPIVPILTWGFFLSNFPRAARIVKERGRFTEGEEKEKGRIEEEFKKEEERLEEEGEEEEEGEGEGEEEG*

Sequence

>CNT3037862
GCTCCTTCGTCTGTGGCATTGGACCATCAGCACCAGAAACAACCAAAATCGCTCCATCCATTTGAGCAGCACCAGTAATCATATTCTTGACATAATCAGC
ATGTCCAGGACAATCAACATGAGCATAATGTCGACTCTCAGTCTCGTACTCGACAGTAGCTGTATTAATCGTAATACCACGAGCTCGTTCTTCCGGGGCA
GCGTCAATTTCATCGTATTTCTTTGGGGCTTTGCTTAAAGCCATGGTTAAAGCAGCCGTGAGAGTCGTTTTACCATGGTCGACATGGCCAATTGTCCCAA
TATTGACATGGGGTTTCTTCCTCTCGAATTTCCCACGAGCGGCACGAATTGTTAAGGAACGAGGACGGTTTACAGAAGGGGAAGAGAAGGAGAAAGGACG
AATTGAAGAAGAGTTCAAGAAAGAGGAAGAAAGGTTGGAAGAGGAAGGGGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGAAGAAGGGTGAGGGAAA
ACAAGCTTGGAAGAAGTGGAAACGGAAGCTAAGGAAATGGCCG