« Back to Arabidopsis thaliana search


Detailed information on CNT30378024


BLAST search results

BLAST vs Swiss-Prot:
sp|P13114|CHSY_ARATH, E-value = 7e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30507146Arabidopsis thalianaNicotiana attenuata22.1411.4781.97122forward
CNT3045136Arabidopsis thalianaPrunus dulcis28.4925.2482.8157forward
CNT30192407Arabidopsis thalianaSecale cereale24.3220.0681.34134forward
CNT30564019Arabidopsis thalianaActinidia chinensis28.3121.0579.49156forward
CNT3088050Arabidopsis thalianaVigna radiata26.6829.2882.99147forward
CNT30647274Arabidopsis thalianaRosa chinensis24.867.8881.75137forward
CNT30365238Arabidopsis thalianaSorghum bicolor24.3224.3282.09134forward
CNT30355235Arabidopsis thalianaLactuca sativa32.338.5382.02178forward
CNT30151821Arabidopsis thalianaPrunus persica28.4927.2682.17157forward
CNT30573615Arabidopsis thalianaVitis vinifera24.148.6980.45133forward
CNT30705527Arabidopsis thalianaPrunus avium25.5930.4582.27141forward
CNT30103826Arabidopsis thalianaOryza rufipogon20.5116.3584.07113forward
CNT30114125Arabidopsis thalianaFicus carica25.5918.2683.69141forward

Expression of CNT30378024

Sequence

>CNT30378024
CTTCCTTAATTATTGCGTAAACATATAATGATTATATTATATAAAACATAAGACAGGATTAAAGTTTTGCGTAGGTAGGTAGGCAGATAGAAGGCAAGCG
TTCTGTTTAGAGAGGAACGCTGTGCAAGACGACTGTCTCAACAGTGAGACCTGGTCCGAAACCAAACAAGACACCCCACTCCAACCCTTCTCCTGTCGTG
GCCACACCATCCTTAGCTGACTTCCTCCTCATCTCGTCTAGTATGAAGAGAACGCACGCGCTCGACATGTTTCCATACTCGCTCAACACGTGACGTGTCG
CCCTCATCTTCTCTTCCTTTAGTCCTAGCTTTATCTCCACCTGGTCTAGGATCGCTGGACCTCCAGGGTGGGCTATCCAGAAGAGGGAGTTCCAGTGGGT
GTCAGAGGGACCACGGAAGGTAACGGCTGTGATCTCAGAGCAGACAACGAGGACACGTGCTCCACGATTGTTCTCGGCGAGATCCTTAGCGATACGGAGG
ACAGTACCGCCGGCGAAGCAACCTTGCTGGTACATCATGAGACGCTTGACG