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Detailed information on CNT30377107


BLAST search results

BLAST vs Swiss-Prot:
sp|P25819|CATA2_ARATH, E-value = 1e-108

BLAST vs NONCODE:
NONGMAT000677, E-value = 5e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692136Arabidopsis thalianaOryza sativa37.2114.3884.09176forward
CNT30640190Arabidopsis thalianaNymphaea colorata23.8913.1281.42113forward
CNT30281433Arabidopsis thalianaChenopodium quinoa39.1117.8781.62185forward
CNT3070085Arabidopsis thalianaQuercus suber58.7742.6480.22278forward
CNT30380803Arabidopsis thalianaManihot esculenta59.4159.9182.56281forward
CNT30405510Arabidopsis thalianaBeta vulgaris39.5339.7981.28187forward
CNT30709260Arabidopsis thalianaGlycine max34.6761.8981.1164forward
CNT3046375Arabidopsis thalianaPrunus dulcis47.1531.9581.61223forward
CNT30305192Arabidopsis thalianaTriticum aestivum64.956.6481.11307forward
CNT30563752Arabidopsis thalianaActinidia chinensis29.628.7589.29140forward
CNT30668770Arabidopsis thalianaTriticum dicoccoides64.940.0881.43307forward
CNT30260467Arabidopsis thalianaBrassica rapa43.5549.493.2206forward
CNT30475173Arabidopsis thalianaSaccharum spontaneum62.7939.9779.8297forward
CNT301996Arabidopsis thalianaZea mays34.0436.9381.37161forward
CNT30654455Arabidopsis thalianaRosa chinensis46.0947.779.82218forward
CNT30715065Arabidopsis thalianaMalus domestica golden56.4518.7882.4267forward
CNT30624536Arabidopsis thalianaDaucus carota46.0915.5287.16218forward
CNT30687547Arabidopsis thalianaTriticum urartu47.9910082.82227forward
CNT30369978Arabidopsis thalianaOryza glumipatula37.2123.4483.52176forward
CNT30154060Arabidopsis thalianaPrunus persica27.713.0586.26131forward
CNT30574555Arabidopsis thalianaVitis vinifera32.1418.3881.58152forward
CNT30704838Arabidopsis thalianaPrunus avium30.8728.0280.14146forward
CNT3022569Arabidopsis thalianaPopulus trichocarpa39.3221.4584.41186forward
CNT3038372Arabidopsis thalianaCucumis melo87.3237.5582.81413forward
CNT30575497Arabidopsis thalianaOryza barthii37.2114.0483.52176forward

Expression of CNT30377107

Peptides detected in this lncRNA

>peptide 1 (82 aa)
TDPLTFSRTDSRINDLDKELPFRVVSSSYRVIQVLSRMTVVGSSNTNCIFFQKRLDSTSWFPMELHVVSFASFVDQHVCIDT*

Sequence

>CNT30377107
TACTGACCCTCTCACGTTTTCCAGAACAGACAGCAGGATCAATGATTTGGATAAAGAGCTTCCATTCAGGGTAGTTTCCAGCAGCTATAGAGTCATACAA
GTCTTGAGTCGCATGACTGTGGTTGGTTCCTCCAACACGAATTGCATCTTCTTCCAAAAGAGACTTGACTCCACAAGTTGGTTTCCAATGGAACTTCACG
TAGTGAGCTTTGCCAGCTTTGTTGATCAACATGTATGTATTGACACCTGAACCATCCATGTGCCTGTAATCTTGTGGGATACCGATATCATCGAAGAGGA
AAGTGAACATGTTCAAACTTTCAGGGTGGTGGGAGAAGAAGTCAAGGATTCTCCAGTTCTCTTGGATGTGAGATTTTGGGTTCGGCTTAAGAGCGTGGAC
CATGTCAGGGAACTTCATCCCATCGCGGATGAAGAAAACAGGAAAGTTGTTTCCAACAAGATCAAAGTTCCCC