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Detailed information on CNT30376702


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 9e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30174473Arabidopsis thalianaVigna angularis8.2420.7888.6853forward
CNT30114630Arabidopsis thalianaEutrema salsugineum21.1544.4481.62136forward

Expression of CNT30376702

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MPKTLAFRAVQRQAAASRSTKPLRSEQQGFTGGVPN*

>peptide 2 (37 aa)
SIEGWIDISSTYETRRNLLATNIEKKAERDGNIKINA*

Sequence

>CNT30376702
AATCAATCGAAGGGTGGATAGATATATCAAGCACATACGAAACCAGAAGGAACCTTCTTGCCACAAACATTGAGAAGAAGGCTGAGAGAGACGGGAACAT
TAAGATTAATGCCTAAAACTTTAGCCTTTAGGGCGGTGCAGAGACAAGCGGCAGCCTCAAGATCAACTAAACCATTGAGGAGCGAACAACAAGGCTTCAC
TGGTGGTGTTCCCAACTGAATTTTGAGAAGATCCTTGAGAACATTGGCGCAAACGCCGAGCTTGAGAGTGTCTTTAGGGCAGCTTCCGGTGGACTTGGGC
TTAGGGCGGTGCAGAGACAAGCGGCAGCCTCAAGATCAACTAAACCATTGAGGAGCGAACAACAAGGCTTCACTGGTGGTGTTCCCAACTGAATTTTGAG
AAGATCCTTGAGAACATTGGCGCAAACGCCGAGCTTGAGAGTGTCTTTAGGGCAGCTTCCGGTGGACTTGGGCTTAGGTTTGGGTTTAGGGGTGGAACTG
CAGCCACCGCCACATGCGGTGGTTAAAGTGAAAAAAAGAATGTTGAATGTGAGGAAAATGACAAGAGAGGCTGAAATTTTTGAAGCCATTTCTCAAAAAA
TCAAATTTCTATTTTAGGTAAGAAGTTTTAAGATAGAAGTATT