« Back to Arabidopsis thaliana search


Detailed information on CNT30376494


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234855Arabidopsis thalianaBrassica oleracea37.0534.4592.23103forward
CNT30263420Arabidopsis thalianaBrassica rapa76.2640.0891.04212forward
CNT30477160Arabidopsis thalianaArabidopsis halleri60.4375.3497.02168forward

Expression of CNT30376494

Peptides detected in this lncRNA

>peptide 1 (57 aa)
GRDSVAEELEGVGGSGTDGEGGGTVAEDDRSGRRLTEENALSLDPFGFVQHRRSLEE*

Sequence

>CNT30376494
GCGGGAGGGACTCTGTTGCGGAGGAGCTTGAGGGTGTAGGCGGAAGCGGCACGGACGGTGAGGGAGGTGGCACGGTTGCGGAGGACGACAGAAGCGGAAG
AAGGCTGACGGAAGAGAACGCTTTGTCCCTTGACCCATTCGGATTTGTCCAACACCGGAGAAGCCTTGAGGAGTGAGGTTGATGCCATTTTTTTTTGTGT
GTGTTATCTCTTTTCTCTGCCTTTGGTTTCTTTGAGAGACTCACAGTAAACGCTTATGACACCACCCTTATCTCTCAC