Detailed information on CNT3037642


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 3e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390478Cucumis meloTriticum turgidum40.759.0682.41108forward
CNT30564216Cucumis meloActinidia chinensis4047.5384.91106forward
CNT30172489Cucumis meloTrifolium pratense39.258.0787.5104forward
CNT30217112Cucumis meloKalanchoe fedtschenkoi34.729.5988.0492forward
CNT30720963Cucumis meloTriticum spelta36.617.4182.4797forward
CNT30359901Cucumis meloLactuca sativa33.5813.1387.6489forward
CNT30570425Cucumis meloVitis vinifera40.756.2186.11108forward

Expression of CNT3037642

Peptides detected in this lncRNA

>peptide 1 (51 aa)
RGSGVFFLPVKVNDGAVDGSPSLNDATPYIVKQMLKMTMRPPAASEPAPPA*

Sequence

>CNT3037642
GCAGAGGATCAGGGGTCTTCTTCCTGCCAGTCAAAGTCAATGATGGTGCGGTAGATGGCTCTCCTTCATTGAATGATGCAACACCATACATTGTCAAGCA
GATGCTCAAAATGACAATGAGACCACCGGCAGCCAGTGAGCCTGCTCCTCCGGCGTAGGCTGGGAGGTTTGAAAGGTACCATGCTATCAGTGGGCTTGAG
GTTACTGGAGTCTCAAGGCTTCCAATGAATGGGTCTCCATTGATTGGCTGGATCACTTGGTAAGT